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OR_08142018_2_5m_0_1um_scaffold_405

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_2_5m_0_1um_scaffold_405_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

266..538
DNA (273bp) protein (91aa)
Competence protein ComEA id=1343840 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
competence protein ComEA
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_405_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

736..1512
DNA (777bp) protein (259aa)
zinc/iron permease n=1 Tax=Thiobacillus denitrificans RepID=UPI000363172F
ZIP Zinc transporter
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_405_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1444..1668)
DNA (225bp) protein (75aa)
Uncharacterized protein id=1343842 bin=GWE1_T_denit_62_9 species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_405_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1695..3026
DNA (1332bp) protein (444aa)
Ribosomal protein S12 methylthiotransferase RimO id=1343843 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_405_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3045..4043)
DNA (999bp) protein (333aa)
Putative uncharacterized protein id=1343844 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_405_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4074..4502
DNA (429bp) protein (143aa)
Putative uncharacterized protein id=1343845 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_405_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4546..5790
DNA (1245bp) protein (415aa)
Lipoprotein releasing system, transmembrane protein, LolC/E family id=1343846 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
LolC/E family lipoprotein releasing system, transmembrane protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_405_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5783..6508
DNA (726bp) protein (242aa)
Lipoprotein-releasing system ATP-binding protein LolD id=1343847 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
lipoprotein releasing system, ATP-binding protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_405_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6521..8863
DNA (2343bp) protein (781aa)
DNA internalization-related competence protein ComEC/Rec2; K02238 competence protein ComEC id=12495426 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
DNA internalization-related competence protein ComEC/Rec2
DNA internalization-related competence protein ComEC/Rec2 {ECO:0000313|EMBL:AAZ97712.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_08142018_2_5m_0_1um_scaffold_405_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8860..11001
DNA (2142bp) protein (714aa)
GTP diphosphokinase, RelA/SpoT protein (EC:2.7.6.5)
GTP pyrophosphokinase n=1 Tax=Thiobacillus denitrificans RepID=UPI00035C7756
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_2_5m_0_1um_scaffold_405_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11017..11424
DNA (408bp) protein (136aa)
Putative uncharacterized protein id=1320286 bin=GWE1_T_denit_62_9 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_405_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11556..12698)
DNA (1143bp) protein (381aa)
Sulfurtransferase id=1320287 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
tRNA 2-selenouridine synthase
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_405_13
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13145..13594)
DNA (450bp) protein (150aa)
SsrA-binding protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=SSRP_THIDA
smpB; SsrA-binding protein
SsrA-binding protein {ECO:0000255|HAMAP-Rule:MF_00023}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_08142018_2_5m_0_1um_scaffold_405_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13645..14079
DNA (435bp) protein (145aa)
cyclase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037DCD4F
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_1um_scaffold_405_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14076..14432
DNA (357bp) protein (119aa)
Protein RnfH id=1320291 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_405_16
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14719..15459
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003777994
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97439.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_08142018_2_5m_0_1um_scaffold_405_17
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15632..17545)
DNA (1914bp) protein (638aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037E268C
Uncharacterized protein {ECO:0000313|EMBL:GAO37019.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
hypothetical protein
OR_08142018_2_5m_0_1um_scaffold_405_18
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18052..18819)
DNA (768bp) protein (256aa)
Helper of transposition of ISCARN95, IS21 family, ORFB n=2 Tax=mine drainage metagenome RepID=E6QR02_9ZZZZ
istB-like ATP binding family protein
IstB-like ATP binding family protein {ECO:0000313|EMBL:CDG80694.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
OR_08142018_2_5m_0_1um_scaffold_405_19
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18923..19555)
DNA (633bp) protein (211aa)
Transposase of ISCARN95, IS21 family, ORFA n=1 Tax=mine drainage metagenome RepID=E6QR03_9ZZZZ
integrase core domain protein
Integrase core domain protein {ECO:0000313|EMBL:CDG80695.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
OR_08142018_2_5m_0_1um_scaffold_405_20

Not on your lists

comp(19598..20365)
DNA (768bp) protein (256aa)
Transposase of ISCARN95, IS21 family, ORFA n=1 Tax=mine drainage metagenome RepID=E6QUS2_9ZZZZ
Transposase of ISCARN95, IS21 family, ORFA {ECO:0000313|EMBL:CBI10995.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Mobile element protein
OR_08142018_2_5m_0_1um_scaffold_405_21
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20517..20762)
DNA (246bp) protein (82aa)
Probable site-specific integrase/recombinase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SIK4_THIDA
site-specific integrase/recombinase
Probable site-specific integrase/recombinase {ECO:0000313|EMBL:AAZ97524.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_08142018_2_5m_0_1um_scaffold_405_22
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21209..21400
DNA (192bp) protein (64aa)
Possible Transcriptional Regulator n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SIK2_THIDA
transcriptional regulator
Possible Transcriptional Regulator {ECO:0000313|EMBL:AAZ97526.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_08142018_2_5m_0_1um_scaffold_405_23
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21475..22800)
DNA (1326bp) protein (442aa)
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI0003610B75
hipA; HipA protein
Tax=RBG_16_Betaproteobacteria_58_11_curated
OR_08142018_2_5m_0_1um_scaffold_405_24
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22790..23083)
DNA (294bp) protein (98aa)
Putative transcription factor, MBF1 like protein n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8Z6S1_9GAMM
transcriptional regulator
Tax=RBG_16_Betaproteobacteria_58_11_curated
OR_08142018_2_5m_0_1um_scaffold_405_25
unknown

Not on your lists

comp(23208..23360)
DNA (153bp) protein (51aa)

This feature has no annotations

Displaying 25 items

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