ggKbase home page

OR_08142018_2_5m_0_1um_scaffold_581

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_2_5m_0_1um_scaffold_581_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1580)
DNA (1578bp) protein (526aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
transcription-repair coupling factor n=1 Tax=Thiobacillus thioparus RepID=UPI00036D1DB7
transcription-repair coupling factor
OR_08142018_2_5m_0_1um_scaffold_581_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1972..2217
DNA (246bp) protein (82aa)
inorganic pyrophosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase id=1371048 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_2_5m_0_1um_scaffold_581_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2386..2937
DNA (552bp) protein (184aa)
Putative uncharacterized protein id=1371047 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_581_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3131..4414
DNA (1284bp) protein (428aa)
heterodisulfide reductase subunit A (EC:1.8.98.1)
heterodisulfide reductase subunit A n=1 Tax=Thiobacillus thioparus RepID=UPI000360B4C4
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_1um_scaffold_581_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4417..6651
DNA (2235bp) protein (745aa)
heterodisulfide reductase subunit A (EC:1.8.98.1)
heterodisulfide reductase n=1 Tax=Thiobacillus denitrificans RepID=UPI000377FC61
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_1um_scaffold_581_6
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6662..7294
DNA (633bp) protein (211aa)
heterodisulfide reductase subunit C (EC:1.8.98.1)
Heterodisulfide reductase subunit C {ECO:0000313|EMBL:AAZ97599.1}; EC=1.8.98.1 {ECO:0000313|EMBL:AAZ97599.1};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
heterodisulfide reductase n=1 Tax=Thiobacillus denitrificans RepID=UPI00035D510E
OR_08142018_2_5m_0_1um_scaffold_581_7
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7305..8216
DNA (912bp) protein (304aa)
heterodisulfide reductase, B subunit (EC:1.8.98.1)
Heterodisulfide reductase, B subunit {ECO:0000313|EMBL:AAZ97598.1}; EC=1.8.98.1 {ECO:0000313|EMBL:AAZ97598.1};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
heterodisulfide reductase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037F5F55
OR_08142018_2_5m_0_1um_scaffold_581_8
unknown

Not on your lists

comp(8283..8426)
DNA (144bp) protein (48aa)

This feature has no annotations

OR_08142018_2_5m_0_1um_scaffold_581_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9079..9387
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003743809
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97597.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_08142018_2_5m_0_1um_scaffold_581_10
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9475..11694
DNA (2220bp) protein (740aa)
Putative signal transduction histidine kinase n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3J1D6_9GAMM
Putative signal transduction histidine kinase {ECO:0000313|EMBL:EGW21008.1}; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylobacter tundripaludum SV96.;"
sensory histidine kinase
OR_08142018_2_5m_0_1um_scaffold_581_11
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11672..12337
DNA (666bp) protein (222aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3J1D7_9GAMM
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:EGW21009.1}; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylobacter tundripaludum SV96.;"
vsrD; response regulator, LuxR family
OR_08142018_2_5m_0_1um_scaffold_581_12
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12506..14734
DNA (2229bp) protein (743aa)
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ABT1_9PROT
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
OR_08142018_2_5m_0_1um_scaffold_581_13
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14731..16803
DNA (2073bp) protein (691aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q8A6_ACIAP
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ADX47104.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
OR_08142018_2_5m_0_1um_scaffold_581_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17016..17480
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003764590
mnmC; 5-methylaminomethyl-2-thiouridine methyltransferase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Displaying 14 items

View Taxonomy