ggKbase home page

OR_08142018_2_5m_0_1um_scaffold_954

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_2_5m_0_1um_scaffold_954_1
Nitrosomonas sp. AL212, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..260
DNA (258bp) protein (86aa)
Putative uncharacterized protein n=1 Tax=Nitrosomonas sp. AL212 RepID=F9ZJ04_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ26193.1}; TaxID=153948 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. AL212.;"
OR_08142018_2_5m_0_1um_scaffold_954_2
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

304..738
DNA (435bp) protein (145aa)
Putative uncharacterized protein n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G093_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EHQ51230.1}; TaxID=519989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
hypothetical protein
OR_08142018_2_5m_0_1um_scaffold_954_3
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(882..1046)
DNA (165bp) protein (55aa)
transposase, IS4 family protein n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002374FD3
Transposase {ECO:0000313|EMBL:EXI88812.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
transposase IS4 family protein
OR_08142018_2_5m_0_1um_scaffold_954_4
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1604..1789)
DNA (186bp) protein (62aa)
heme exporter protein CcmA id=12494456 bin=THIO_HI species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
heme exporter protein CcmA
Tax=CG_Hydro_01
OR_08142018_2_5m_0_1um_scaffold_954_5
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1789..1995)
DNA (207bp) protein (69aa)
heme exporter protein CcmA id=12494456 bin=THIO_HI species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Tax=CG_Hydro_01
OR_08142018_2_5m_0_1um_scaffold_954_6
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2008..2247)
DNA (240bp) protein (80aa)
heme exporter protein CcmA id=12494456 bin=THIO_HI species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
heme exporter protein CcmA
Tax=CG_Hydro_01
OR_08142018_2_5m_0_1um_scaffold_954_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2331..4673)
DNA (2343bp) protein (781aa)
phosphoenolpyruvate synthase (EC:2.7.9.2)
Phosphoenolpyruvate synthase id=1370568 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_954_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4684..5460
DNA (777bp) protein (259aa)
Putative phosphoenolpyruvate synthase regulatory protein id=1370567 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_954_9
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

5575..5790
DNA (216bp) protein (72aa)
cysteine synthase n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI000369326B
cysteine synthase
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
OR_08142018_2_5m_0_1um_scaffold_954_10
RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5777..6187
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=Nitrosomonas sp. AL212 RepID=F9ZGF3_9PROT
hypothetical protein
Tax=RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated
OR_08142018_2_5m_0_1um_scaffold_954_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6224..6457
DNA (234bp) protein (78aa)
Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) id=1370566 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
diguanylate cyclase/phosphodiesterase
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_954_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6739..7041
DNA (303bp) protein (101aa)
PhnO-like protein id=12498028 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
PhnO
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_2_5m_0_1um_scaffold_954_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7068..7847)
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003641781
tRNA/rRNA methyltransferase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_2_5m_0_1um_scaffold_954_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7892..8851
DNA (960bp) protein (320aa)
glycosyl transferase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003735232
glycosyltransferase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_2_5m_0_1um_scaffold_954_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8855..9397)
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000367C2EC
TPR repeat-containing protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_2_5m_0_1um_scaffold_954_16
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9630..11342
DNA (1713bp) protein (571aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035DC737
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Displaying 16 items

View Taxonomy