ggKbase home page

OR_08142018_2_5m_0_2um_scaffold_1792

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_2_5m_0_2um_scaffold_1792_1
unknown

Not on your lists

comp(3..86)
DNA (84bp) protein (28aa)

This feature has no annotations

OR_08142018_2_5m_0_2um_scaffold_1792_trna_1
unknown

Not on your lists

comp(264..336)
DNA (73bp)
transferRNA Thr
OR_08142018_2_5m_0_2um_scaffold_1792_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(379..783)
DNA (405bp) protein (135aa)
peptidase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037EF3C0
ClpXP protease specificity-enhancing factor
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_2um_scaffold_1792_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(795..1394)
DNA (600bp) protein (200aa)
Stringent starvation protein a id=1331294 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
stringent starvation protein a
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_2um_scaffold_1792_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1497..2222)
DNA (726bp) protein (242aa)
Ubiquinol-cytochrome c reductase cytochrome c1 subunit id=1331293 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
ubiquinol-cytochrome c reductase cytochrome c1 subunit
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_2um_scaffold_1792_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2223..3458)
DNA (1236bp) protein (412aa)
cytochrome B n=1 Tax=Thiobacillus denitrificans RepID=UPI00037FA39A
cytochrome B subunit of cytochrome bc1
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_2um_scaffold_1792_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3462..4067)
DNA (606bp) protein (202aa)
ubiquinol-cytochrome c reductase, iron-sulfur subunit (EC:1.10.2.2)
Ubiquinol-cytochrome c reductase iron-sulfur subunit id=1331291 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_2um_scaffold_1792_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4208..5389
DNA (1182bp) protein (394aa)
Putative protease id=1331290 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
protease
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_2um_scaffold_1792_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5386..5637)
DNA (252bp) protein (84aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036BBAF2
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_2um_scaffold_1792_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5591..5809)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036BBAF2
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_2_5m_0_2um_scaffold_1792_10
Thermochromatium tepidum, Thermochromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5821..6012)
DNA (192bp) protein (64aa)
Putative uncharacterized protein n=1 Tax=Thermochromatium tepidum RepID=C7G4D2_THETI
Putative uncharacterized protein {ECO:0000313|EMBL:BAH98144.1}; TaxID=1050 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thermochromatium.;" source="Thermochromatium tepidum (Chromatium tepidum).;"
putative membrane protein
OR_08142018_2_5m_0_2um_scaffold_1792_11
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6370..6624
DNA (255bp) protein (85aa)
Transposase IS4 family protein n=1 Tax=mine drainage metagenome RepID=T1BFY2_9ZZZZ
Transposase {ECO:0000313|EMBL:EXI88812.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
transposase IS4 family protein
OR_08142018_2_5m_0_2um_scaffold_1792_12
unknown

Not on your lists

6621..6704
DNA (84bp) protein (28aa)

This feature has no annotations

Displaying 13 items

View Taxonomy