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OR_08142018_2_5m_0_2um_scaffold_96

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_2_5m_0_2um_scaffold_96_trna_2
unknown

Not on your lists

comp(278..351)
DNA (74bp)
transferRNA Arg
OR_08142018_2_5m_0_2um_scaffold_96_trna_1
unknown

Not on your lists

comp(434..524)
DNA (91bp)
transferRNA Ser
OR_08142018_2_5m_0_2um_scaffold_96_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(568..1797)
DNA (1230bp) protein (410aa)
aspartate kinase (EC:2.7.2.4)
Aspartokinase id=1321119 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_2um_scaffold_96_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1860..3158)
DNA (1299bp) protein (433aa)
rumA; 23S rRNA (uracil-5-)-methyltransferase RumA (EC:2.1.1.-)
23S rRNA methyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI0003787200
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_2um_scaffold_96_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3248..4024)
DNA (777bp) protein (259aa)
Putative uncharacterized protein id=1321121 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_2um_scaffold_96_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4062..5423)
DNA (1362bp) protein (454aa)
Predicted signal transduction protein containing EAL and modified HD-GYP domains id=1321122 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
signal transduction protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_2um_scaffold_96_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5458..6891
DNA (1434bp) protein (478aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037537DD
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_96_6
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7024..7509
DNA (486bp) protein (162aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
peptidylprolyl isomerase n=1 Tax=Thiobacillus thioparus RepID=UPI00036A19FC
FKBP-type peptidylprolyl isomerase
OR_08142018_2_5m_0_2um_scaffold_96_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7586..8095)
DNA (510bp) protein (170aa)
sterol-binding protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036800B5
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_2_5m_0_2um_scaffold_96_8
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8196..8861)
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003775349
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96930.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_08142018_2_5m_0_2um_scaffold_96_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8858..9805)
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000375A3B9
ABC-type transport system periplasmic component
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_2um_scaffold_96_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9802..10233)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037E82BA
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_2_5m_0_2um_scaffold_96_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10251..11045)
DNA (795bp) protein (265aa)
ABC-type transport system ipermease component id=1351336 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
ABC-type transport system permease
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_2um_scaffold_96_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11108..11641
DNA (534bp) protein (178aa)
Putative uncharacterized protein id=1351337 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_2um_scaffold_96_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11641..12576
DNA (936bp) protein (312aa)
peptidase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036A6678
TPR repeat-containing Zn-dependent protease
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_2um_scaffold_96_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12573..14789
DNA (2217bp) protein (739aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000371336D
adenylyl cyclase class-3/4/guanylyl cyclase
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_2um_scaffold_96_15
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14806..15570
DNA (765bp) protein (255aa)
cyclic-AMP phosphodiesterase id=12493389 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
cyclic-AMP phosphodiesterase
cAMP phosphodiesterase class-II {ECO:0000313|EMBL:AAZ96937.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_08142018_2_5m_0_2um_scaffold_96_16
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15675..16985)
DNA (1311bp) protein (437aa)
Flavocytochrome c sulphide dehydrogenase flavin-binding n=1 Tax=Chlorobaculum parvum (strain NCIB 8327) RepID=B3QQX4_CHLP8
Flavocytochrome c sulfide dehydrogenase
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
OR_08142018_2_5m_0_2um_scaffold_96_17
Halorhodospira halochloris, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16989..17327)
DNA (339bp) protein (113aa)
Cytochrome c, class I n=1 Tax=Halorhodospira halophila (strain DSM 244 / SL1) RepID=A1WW75_HALHL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHK80457.1}; TaxID=1354791 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodospira halochloris str. A.;"
OR_08142018_2_5m_0_2um_scaffold_96_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17388..17909)
DNA (522bp) protein (174aa)
Putative uncharacterized protein id=1332273 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_2um_scaffold_96_19
unknown

Not on your lists

comp(18282..18437)
DNA (156bp) protein (52aa)

This feature has no annotations

OR_08142018_2_5m_0_2um_scaffold_96_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18618..21167)
DNA (2550bp) protein (850aa)
multi-sensor hybrid histidine kinase (EC:2.7.3.-)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035DF613
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_2um_scaffold_96_21
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21187..22257)
DNA (1071bp) protein (357aa)
transport system ATPase; K02010 iron(III) transport system ATP-binding protein [EC:3.6.3.30] id=12493384 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
transport system ATPase
Transport system ATPase {ECO:0000313|EMBL:AAZ96941.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_08142018_2_5m_0_2um_scaffold_96_22
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22335..23960
DNA (1626bp) protein (542aa)
iron ABC transporter permease n=1 Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI000364220A
Fe3+ ABC transporter permease
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
OR_08142018_2_5m_0_2um_scaffold_96_23
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24012..25034)
DNA (1023bp) protein (341aa)
Iron deficiency-induced protein A n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2FYK1_9BURK
Iron deficiency-induced protein A {ECO:0000313|EMBL:ESH86008.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
fbpA; iron(iii)-binding periplasmic protein precursor
OR_08142018_2_5m_0_2um_scaffold_96_24
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25209..25835)
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035F5A88
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96944.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_08142018_2_5m_0_2um_scaffold_96_25
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25879..26358)
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037A7DBC
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_96_26
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26432..27118
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003683F5E
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_2_5m_0_2um_scaffold_96_27
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27397..29076
DNA (1680bp) protein (560aa)
2-octaprenylphenol hydroxylase (EC:1.14.13.-)
Probable ubiquinone biosynthesis protein id=1352757 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_2um_scaffold_96_28
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29086..31368)
DNA (2283bp) protein (761aa)
Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) id=1352756 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
diguanylate cyclase/phosphodiesterase
Tax=GWE1_Thiobacillus_62_9_curated
Displaying items 1-30 of 64 in total

View Taxonomy