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OR_08142018_2_5m_0_2um_scaffold_187

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_2_5m_0_2um_scaffold_187_1
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..189)
DNA (189bp) protein (63aa)
Transposase, IS4 family protein n=2 Tax=Thiocapsa marina 5811 RepID=F9UHF2_9GAMM
Transposase, IS4 family protein {ECO:0000313|EMBL:EGV16410.1}; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
transposase, IS4 family protein
OR_08142018_2_5m_0_2um_scaffold_187_2
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

416..1351
DNA (936bp) protein (312aa)
Peptidoglycan-binding domain 1 protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V1N9_VARPE
peptidoglycan-binding domain 1 protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
OR_08142018_2_5m_0_2um_scaffold_187_3
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1404..1901
DNA (498bp) protein (166aa)
Uncharacterized protein {ECO:0000313|EMBL:KGM41171.1}; TaxID=1538295 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
OR_08142018_2_5m_0_2um_scaffold_187_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2385..3416)
DNA (1032bp) protein (344aa)
alanine racemase (EC:5.1.1.1)
Alanine racemase id=1355424 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_2um_scaffold_187_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3457..4848)
DNA (1392bp) protein (464aa)
primary replicative DNA helicase (EC:3.6.1.-)
DNA helicase n=1 Tax=Thiobacillus denitrificans RepID=UPI00035F1B36
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_2um_scaffold_187_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4984..5433)
DNA (450bp) protein (150aa)
50S ribosomal protein L9 id=1355426 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
50S ribosomal protein L9
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_2um_scaffold_187_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5444..5734)
DNA (291bp) protein (97aa)
30S ribosomal protein S18 id=1355427 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
rpsR; 30S ribosomal protein S18
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_2um_scaffold_187_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5738..6028)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000365C3E5
restart primosome assembly protein PriB
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_187_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6046..6444)
DNA (399bp) protein (133aa)
30S ribosomal protein S6 n=1 Tax=Thiobacillus thioparus RepID=UPI0003732C8A
rpsF; 30S ribosomal protein S6
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_2um_scaffold_187_10
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6598..8841)
DNA (2244bp) protein (748aa)
ornithine decarboxylase (EC:4.1.1.17)
Lysine decarboxylase {ECO:0000313|EMBL:AAZ98059.1}; EC=4.1.1.18 {ECO:0000313|EMBL:AAZ98059.1};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
lysine decarboxylase n=1 Tax=Thiobacillus thioparus RepID=UPI00036C1573
OR_08142018_2_5m_0_2um_scaffold_187_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8919..9485)
DNA (567bp) protein (189aa)
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13)
Deoxycytidine triphosphate deaminase id=1369992 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_2um_scaffold_187_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9485..10573)
DNA (1089bp) protein (363aa)
ATP-binding protein involved in chromosome partitioning id=1369991 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
chromosome partitioning ATPase
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_2um_scaffold_187_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10714..11073)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036CF918
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_2_5m_0_2um_scaffold_187_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11096..11647)
DNA (552bp) protein (184aa)
RNA pyrophosphohydrolase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037738EA
dinucleoside polyphosphate hydrolase
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_2um_scaffold_187_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11800..12570)
DNA (771bp) protein (257aa)
spermidine synthase (EC:2.5.1.16)
Putative uncharacterized protein id=1369987 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_2_5m_0_2um_scaffold_187_16
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12652..14394
DNA (1743bp) protein (581aa)
prolyl-tRNA synthetase (EC:6.1.1.15)
prolyl-tRNA synthetase n=1 Tax=Thiobacillus thioparus RepID=UPI00035F659B
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_2_5m_0_2um_scaffold_187_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14408..15043
DNA (636bp) protein (212aa)
transglycosylase n=1 Tax=Thiobacillus denitrificans RepID=UPI00035D1C17
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_187_18
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15274..15792
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000382D9EF
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_2_5m_0_2um_scaffold_187_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15873..16394)
DNA (522bp) protein (174aa)
RND multidrug efflux membrane fusion protein MexE id=1368054 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
RND multidrug efflux membrane fusion protein MexE
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_2um_scaffold_187_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16394..17659)
DNA (1266bp) protein (422aa)
Putative uncharacterized protein id=1368053 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_2um_scaffold_187_21
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17656..18162)
DNA (507bp) protein (169aa)
Putative uncharacterized protein id=1368052 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_2um_scaffold_187_22
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18189..18683)
DNA (495bp) protein (165aa)
Thioredoxin id=1368051 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
thioredoxin
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_2um_scaffold_187_23
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18697..20097
DNA (1401bp) protein (467aa)
aspA; aspartate ammonia-lyase (EC:4.2.1.2)
Aspartate ammonia-lyase id=1368050 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_2um_scaffold_187_24
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20147..21061
DNA (915bp) protein (305aa)
Ribosome biogenesis GTPase A id=1368049 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
GTPase
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_2um_scaffold_187_25
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21062..21754)
DNA (693bp) protein (231aa)
6-phosphogluconolactonase (EC:3.1.1.31)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037E6919
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_187_26
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21754..23244)
DNA (1491bp) protein (497aa)
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
Glucose-6-phosphate 1-dehydrogenase id=1350218 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_2um_scaffold_187_27
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23246..24154)
DNA (909bp) protein (303aa)
6-phosphogluconate dehydrogenase (EC:1.1.1.44); K00033 6-phosphogluconate dehydrogenase [EC:1.1.1.44] id=12496688 bin=THIO_MID species=Nitrosomonas europaea genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
6-phosphogluconate dehydrogenase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_2_5m_0_2um_scaffold_187_28
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24283..24918)
DNA (636bp) protein (212aa)
Multiple antibiotic resistance (MarC)-related proteins id=1350216 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
multiple antibiotic resistance (MarC)-like proteins
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_2um_scaffold_187_29
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24949..25650)
DNA (702bp) protein (234aa)
tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI000380F2EC
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_2um_scaffold_187_30
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25653..26456)
DNA (804bp) protein (268aa)
thiazole synthase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036B07CD
thiG; thiazole synthase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying items 1-30 of 45 in total

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