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OR_08142018_2_5m_0_2um_scaffold_316

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_2_5m_0_2um_scaffold_316_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(187..1080)
DNA (894bp) protein (298aa)
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase (EC:2.1.1.72)
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00036A5A6D
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_316_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1077..2240)
DNA (1164bp) protein (388aa)
succinyl-diaminopimelate desuccinylase (EC:3.5.1.18)
Succinyl-diaminopimelate desuccinylase id=1367912 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_2um_scaffold_316_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2247..2594)
DNA (348bp) protein (116aa)
arsenate reductase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037B8342
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_2_5m_0_2um_scaffold_316_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2679..4478
DNA (1800bp) protein (600aa)
metal ABC transporter permease n=1 Tax=Thiobacillus thioparus RepID=UPI000381B763
ABC-type transport system ATPase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_316_5
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5222..6940
DNA (1719bp) protein (573aa)
Histidine kinase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJ32_AZOSU
histidine kinase
Tax=BJP_IG2103_Dechloromonas_63_51
OR_08142018_2_5m_0_2um_scaffold_316_6
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6937..7572
DNA (636bp) protein (212aa)
Response regulator n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJ33_AZOSU
LuxR family transcriptional regulator
Tax=BJP_IG2103_Dechloromonas_63_51
OR_08142018_2_5m_0_2um_scaffold_316_7
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7736..8122
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ABT3_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAO28104.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
OR_08142018_2_5m_0_2um_scaffold_316_8
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8199..9425
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B2T8_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAO28103.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
OR_08142018_2_5m_0_2um_scaffold_316_9
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9453..10220
DNA (768bp) protein (256aa)
Rhodanese-like protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AG75_9PROT
rhodanese-like protein
Tax=BJP_IG2103_Dechloromonas_63_51
OR_08142018_2_5m_0_2um_scaffold_316_10
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10278..10697
DNA (420bp) protein (140aa)
Rhodanese-like protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AG75_9PROT
rhodanese-like protein
Tax=BJP_IG2103_Dechloromonas_63_51
OR_08142018_2_5m_0_2um_scaffold_316_11
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10749..10958)
DNA (210bp) protein (70aa)
Oxidoreductase FAD/NAD(P)-binding domain protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CTQ8_SIDLE
oxidoreductase FAD/NAD(P)-binding domain protein
Oxidoreductase FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:BAO29224.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
OR_08142018_2_5m_0_2um_scaffold_316_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11705..13000
DNA (1296bp) protein (432aa)
Putative integral membrane protein id=1319192 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
integral membrane protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_316_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13188..14153
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036EE831
NAD/FAD-dependent oxidoreductase
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_2um_scaffold_316_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14245..15129)
DNA (885bp) protein (295aa)
Putative diguanylate cyclase (GGDEF domain) id=1319189 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
diguanylate cyclase
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_2um_scaffold_316_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15597..17015
DNA (1419bp) protein (473aa)
RND efflux system, outer membrane lipoprotein, NodT family id=1319187 bin=GWE1_T_denit_62_9 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
NodT family RND efflux system outer membrane lipoprotein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_2um_scaffold_316_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17012..18301
DNA (1290bp) protein (430aa)
Efflux transporter, RND family, MFP subunit id=1319186 bin=GWE1_T_denit_62_9 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
RND family efflux transporter MFP subunit
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_2um_scaffold_316_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18298..19002
DNA (705bp) protein (235aa)
ABC transporter related id=1319185 bin=GWE1_T_denit_62_9 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
ABC transporter
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_2um_scaffold_316_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19002..20204
DNA (1203bp) protein (401aa)
Uncharacterized protein id=1319184 bin=GWE1_T_denit_62_9 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_2um_scaffold_316_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21047..22993
DNA (1947bp) protein (649aa)
Peptidase M, neutral zinc metallopeptidases, zinc-binding site id=1345795 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
pepN; aminopeptidase
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_2um_scaffold_316_20
unknown

Not on your lists

24020..24112
DNA (93bp) protein (31aa)

This feature has no annotations

OR_08142018_2_5m_0_2um_scaffold_316_21
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24249..24509)
DNA (261bp) protein (87aa)
translation initiation factor IF-1 n=1 Tax=Thiobacillus denitrificans RepID=UPI000368996D
translation initiation factor IF-1
Translation initiation factor IF-1 2 {ECO:0000255|HAMAP-Rule:MF_00075}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_08142018_2_5m_0_2um_scaffold_316_22
R_Methylophilales_57_10, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25349..25525
DNA (177bp) protein (59aa)
Integrase catalytic region n=1 Tax=mine drainage metagenome RepID=T0ZUY6_9ZZZZ
integrase family protein
Tax=RIFCSPHIGHO2_02_FULL_Methylophilales_57_10_curated
OR_08142018_2_5m_0_2um_scaffold_316_23
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25623..25946
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036D3D14
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_2_5m_0_2um_scaffold_316_24
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25963..26301
DNA (339bp) protein (113aa)
XRE family transcriptional regulator n=1 Tax=Thiobacillus denitrificans RepID=UPI00037FD31C
transcriptional regulator
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Displaying 24 items

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