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OR_08142018_2_5m_0_2um_scaffold_199

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_2_5m_0_2um_scaffold_199_1
RIFOXYD1_FULL_Bdellovibrionales_53_11_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

13..762
DNA (750bp) protein (250aa)
BioH; K02170 pimelyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] id=12494190 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
BioH
Tax=RIFOXYD1_FULL_Bdellovibrionales_53_11_curated
OR_08142018_2_5m_0_2um_scaffold_199_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

755..1675
DNA (921bp) protein (307aa)
malonyl-CoA O-methyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI0003694920
biotin biosynthesis protein BioC
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_2_5m_0_2um_scaffold_199_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1672..2346
DNA (675bp) protein (225aa)
dethiobiotin synthase (EC:6.3.3.3)
ATP-dependent dethiobiotin synthetase BioD n=1 Tax=Thiobacillus denitrificans RepID=UPI00036AD9D6
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_2_5m_0_2um_scaffold_199_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2595..3743
DNA (1149bp) protein (383aa)
cytochrome c oxidase subunit II (EC:1.9.3.1)
Cytochrome c oxidase subunit 2 id=1308419 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_199_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3767..5368
DNA (1602bp) protein (534aa)
cytochrome c oxidase subunit I (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] id=12495706 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
cytochrome c oxidase subunit I (EC:1.9.3.1)
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_199_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5386..5484
DNA (99bp) protein (33aa)
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_199_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5488..6042
DNA (555bp) protein (185aa)
Probable cytochrome C oxidase assembly transmembrane protein id=1308422 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
cytochrome C oxidase assembly protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_199_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6035..6232
DNA (198bp) protein (66aa)
Putative uncharacterized protein id=1308423 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_199_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6264..7130
DNA (867bp) protein (289aa)
Cytochrome c oxidase, subunit III id=1308424 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
cytochrome c oxidase subunit III
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_199_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7188..7388)
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000379082B
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_199_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7437..8186
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003639752
SURF1 family protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_199_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8194..8757
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000366866E
transmembrane protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_199_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8770..9753
DNA (984bp) protein (328aa)
cytochrome C oxidase subunit I n=1 Tax=Thiobacillus thioparus RepID=UPI000376613A
cytochrome aa3 oxidase assembly protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_199_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9756..10652
DNA (897bp) protein (299aa)
protoheme IX farnesyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00036A9E83
protoheme IX farnesyltransferase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_199_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10736..11200
DNA (465bp) protein (155aa)
Putative uncharacterized protein id=1308430 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
BadM/Rrf2 family transcriptional regulator
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_199_16
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11197..11781
DNA (585bp) protein (195aa)
photosynthetic protein synthase I n=1 Tax=Thiobacillus denitrificans RepID=UPI0003809900
SCO1/SenC family protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_199_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11904..13358
DNA (1455bp) protein (485aa)
cbb3-type cytochrome c oxidase subunit I; K00404 cytochrome c oxidase cbb3-type subunit I [EC:1.9.3.1] id=12495694 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
cbb3-type cytochrome c oxidase subunit I
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_199_18
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13374..14120
DNA (747bp) protein (249aa)
peptidase S41 n=1 Tax=Thiobacillus denitrificans RepID=UPI00035EC298
cbb3-type cytochrome c oxidase subunit II
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_199_19
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14145..14357
DNA (213bp) protein (71aa)
Putative uncharacterized protein id=1308434 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_199_20
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14354..15274
DNA (921bp) protein (307aa)
cytochrome C oxidase subunit III n=1 Tax=Thiobacillus denitrificans RepID=UPI00037CD88D
cytochrome c oxidase cbb3-type subunit III
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_199_21
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15348..16871
DNA (1524bp) protein (508aa)
(Fe-S)-binding protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036DBDEB
(Fe-S)-binding protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_199_22
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16868..17644
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000381FE4C
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_199_23
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17641..17826
DNA (186bp) protein (62aa)
Cytochrome oxidase maturation protein cbb3-type id=1308438 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
cytochrome oxidase maturation protein cbb3-type
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_199_24
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17862..17969
DNA (108bp) protein (36aa)
hypothetical protein id=1308439 bin=GWE1_T_denit_62_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_199_25
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18048..18893)
DNA (846bp) protein (282aa)
RNA polymerase sigma factor id=1308440 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
sigma-70 factor
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_199_26
unknown

Not on your lists

comp(19034..19996)
DNA (963bp) protein (321aa)

This feature has no annotations

OR_08142018_2_5m_0_2um_scaffold_199_27
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20342..22381)
DNA (2040bp) protein (680aa)
Sulfur oxidation protein SoxB n=1 Tax=Caenispirillum salinarum AK4 RepID=K9H957_9PROT
5'-nucleotidase {ECO:0000313|EMBL:GAO37203.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
5'-nucleotidase/2' 3'-cyclic phosphodiesterase
OR_08142018_2_5m_0_2um_scaffold_199_28
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23060..24907
DNA (1848bp) protein (616aa)
Putative 5'-nucleotidase/2' 3'-cyclic phosphodiesterase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SEW2_THIDA
Uncharacterized protein {ECO:0000313|EMBL:KGM56436.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
5'-nucleotidase/2' 3'-cyclic phosphodiesterase
OR_08142018_2_5m_0_2um_scaffold_199_29
unknown

Not on your lists

24981..25157
DNA (177bp) protein (59aa)

This feature has no annotations

OR_08142018_2_5m_0_2um_scaffold_199_30
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25154..28252
DNA (3099bp) protein (1033aa)
hypothetical protein n=1 Tax=Sulfobacillus thermosulfidooxidans RepID=UPI0002E6A539
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW06211.1}; Flags: Precursor;; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfobacillus acidophilus (strain ATCC 700253 / DSM 10332 / NAL).;"
Displaying items 1-30 of 38 in total

View Taxonomy