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OR_08142018_2_5m_0_2um_scaffold_246

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_2_5m_0_2um_scaffold_246_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14..937)
DNA (924bp) protein (308aa)
Hpr(Ser) kinase/phosphatase (EC:2.7.1.-)
aldolase n=1 Tax=Thiobacillus thioparus RepID=UPI00036B6D47
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_246_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(934..1185)
DNA (252bp) protein (84aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003699A67
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_246_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1237..1890)
DNA (654bp) protein (218aa)
hypothetical protein id=12494762 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_246_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2029..2892)
DNA (864bp) protein (288aa)
Release factor glutamine methyltransferase id=1319860 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
modification methylase HemK
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_246_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2896..3978)
DNA (1083bp) protein (361aa)
peptide chain release factor 1 n=1 Tax=Thiobacillus thioparus RepID=UPI000360C624
prfA; peptide chain release factor 1
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_246_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3975..5225)
DNA (1251bp) protein (417aa)
hemA; glutamyl-tRNA reductase (EC:1.2.1.70)
glutamyl-tRNA reductase n=1 Tax=Thiobacillus thioparus RepID=UPI00037F1BED
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_2_5m_0_2um_scaffold_246_7
unknown

Not on your lists

comp(5388..5972)
DNA (585bp) protein (195aa)

This feature has no annotations

OR_08142018_2_5m_0_2um_scaffold_246_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6205..7083)
DNA (879bp) protein (293aa)
taurine catabolism dioxygenase n=1 Tax=Thiobacillus thioparus RepID=UPI00036767FB
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_246_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7092..7712)
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037A9A1A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ98443.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_08142018_2_5m_0_2um_scaffold_246_10
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7733..8635)
DNA (903bp) protein (301aa)
3-mercaptopyruvate sulfurtransferase (EC:2.8.1.2)
3-mercaptopyruvate sulfurtransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI00035FE0D3
Tax=CG_Beta_01
OR_08142018_2_5m_0_2um_scaffold_246_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8660..8992)
DNA (333bp) protein (111aa)
sulfite reductase subunit gamma n=1 Tax=Thiobacillus denitrificans RepID=UPI0003822197
sulfite reductase gamma chain
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_246_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9028..9687)
DNA (660bp) protein (220aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SG16_THIDA
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_246_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9684..9905)
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000376705A
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_2_5m_0_2um_scaffold_246_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10300..11601
DNA (1302bp) protein (434aa)
sulfite reductase, dissimilatory-type subunit alpha (EC:1.8.99.3)
Sulfite reductase, dissimilatory-type alpha subunit id=1364812 bin=GWE1_T_denit_62_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_246_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11683..12753
DNA (1071bp) protein (357aa)
sulfite reductase, dissimilatory-type subunit beta (EC:1.8.99.3); K11181 sulfite reductase, dissimilatory-type beta subunit [EC:1.8.99.3] id=12496405 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
sulfite reductase, dissimilatory-type subunit beta (EC:1.8.99.3)
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_246_16
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12827..13186
DNA (360bp) protein (120aa)
DsrE protein; K07235 tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] id=12494750 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
DsrE protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_246_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13198..13593
DNA (396bp) protein (132aa)
sulfur oxidoreductase n=1 Tax=Thiobacillus thioparus RepID=UPI00037715B8
DsrF protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_246_18
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13605..13904
DNA (300bp) protein (100aa)
DsrH protein; K07237 tRNA 2-thiouridine synthesizing protein B id=12494748 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
DsrH protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_246_19
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13927..14262
DNA (336bp) protein (112aa)
sulfur transfer protein TusE n=1 Tax=Thiobacillus denitrificans RepID=UPI00037846E6
sulfite reductase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_246_20
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14383..15117
DNA (735bp) protein (245aa)
nitrate reductase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037DA333
DsrM protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_246_21
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15168..16691
DNA (1524bp) protein (508aa)
Reductase, iron-sulfur binding subunit, putative id=1364805 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
reductase, iron-sulfur binding subunit
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_246_22
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16750..18717
DNA (1968bp) protein (656aa)
Iron-sulfur cluster-binding protein, GltD family n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SG26_THIDA
glutamate synthase (NADPH) small subunit
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_246_23
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18729..19223
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036BBDD8
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_2um_scaffold_246_24
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19220..19993
DNA (774bp) protein (258aa)
Iron-sulfur cluster protein id=1344884 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
iron-sulfur cluster protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_2um_scaffold_246_25
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20037..21200
DNA (1164bp) protein (388aa)
Molybdopterin oxidoreductase, membrane subunit id=1344883 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
molybdopterin oxidoreductase, membrane subunit
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_246_26
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21256..22662
DNA (1407bp) protein (469aa)
hydrogenobyrinic acid a,c-diamide synthase / cobyrinate a,c-diamide synthase (EC:6.3.5.9 6.3.5.-)
Cobyrinic acid A,C-diamide synthase id=1344882 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_246_27
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22681..23001
DNA (321bp) protein (107aa)
Putative uncharacterized protein id=1344881 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_246_28
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23005..24444
DNA (1440bp) protein (480aa)
uroporphyrinogen-III C-methyltransferase (EC:2.1.1.107); K02302 uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] id=12496418 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
uroporphyrinogen-III C-methyltransferase (EC:2.1.1.107)
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_246_29
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24724..25479
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037F89AE
outer membrane protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_246_30
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25663..27819)
DNA (2157bp) protein (719aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003644F97
replication restart DNA helicase PriA
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying items 1-30 of 37 in total

View Taxonomy