name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
OR_08142018_2_5m_0_2um_scaffold_308_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3..686)
|
queuine tRNA-ribosyltransferase (EC:2.4.2.29)
queuine tRNA-ribosyltransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI000373F84D
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
OR_08142018_2_5m_0_2um_scaffold_308_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(676..1704)
|
S-adenosylmethionine:tRNA ribosyltransferase-isomerase id=1343001 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
queuosine biosynthesis protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
OR_08142018_2_5m_0_2um_scaffold_308_trna_1
unknown
|
Not on your lists |
1799..1882
|
transferRNA Leu
|
|
OR_08142018_2_5m_0_2um_scaffold_308_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2302..3285
|
glucokinase (EC:2.7.1.2)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036B9A57
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
OR_08142018_2_5m_0_2um_scaffold_308_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3352..4671
|
glgC; glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase id=1332709 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
OR_08142018_2_5m_0_2um_scaffold_308_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4655..6385
|
Glycosyl hydrolase family 57 id=1332708 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
glycosyl hydrolase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
OR_08142018_2_5m_0_2um_scaffold_308_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6385..7755
|
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase id=1332707 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
OR_08142018_2_5m_0_2um_scaffold_308_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7752..9962
|
glycogen branching enzyme (EC:2.4.1.18)
glycogen branching protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036D17DF
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
OR_08142018_2_5m_0_2um_scaffold_308_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10021..11493
|
Glycogen synthase id=1332705 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
glycogen/starch synthase, ADP-glucose type
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
OR_08142018_2_5m_0_2um_scaffold_308_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11570..14002
|
phosphorylase (EC:2.4.1.1)
glycogen phosphorylase n=1 Tax=Thiobacillus thioparus RepID=UPI000377E969
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
OR_08142018_2_5m_0_2um_scaffold_308_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14128..15375
|
DEAD/DEAH box helicase domain-containing protein id=5083064 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
DEAD/DEAH box helicase domain-containing protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
OR_08142018_2_5m_0_2um_scaffold_308_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15390..15770)
|
aspartate alpha-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase id=1340319 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
OR_08142018_2_5m_0_2um_scaffold_308_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15845..16690)
|
panC; pantoate--beta-alanine ligase (EC:6.3.2.1)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037F7561
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
OR_08142018_2_5m_0_2um_scaffold_308_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16690..17484)
|
ketopantoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase id=1340316 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
|
|
OR_08142018_2_5m_0_2um_scaffold_308_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17481..18122)
|
deoxyadenosine kinase n=1 Tax=Thiobacillus thioparus RepID=UPI00036D27D8
deoxynucleoside kinase
Tax=GWE1_Thiobacillus_62_9_curated
|
|
OR_08142018_2_5m_0_2um_scaffold_308_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18119..18625)
|
7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (EC:2.7.6.3)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Thiobacillus thioparus RepID=UPI00036297F7
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
OR_08142018_2_5m_0_2um_scaffold_308_16
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18622..19977)
|
poly(A) polymerase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037262B6
poly(A) polymerase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
OR_08142018_2_5m_0_2um_scaffold_308_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20029..20763)
|
Putative Fe3+-siderophores transport system ATPase id=1340312 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Fe3+-siderophores transport system ATPase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
OR_08142018_2_5m_0_2um_scaffold_308_18
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21428..21967
|
hypothetical protein id=12498156 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
OR_08142018_2_5m_0_2um_scaffold_308_19
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22073..22921)
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037D916A
transmembrane ABC transporter permease
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
OR_08142018_2_5m_0_2um_scaffold_308_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23006..23674)
|
peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase id=1340309 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
|
|
OR_08142018_2_5m_0_2um_scaffold_308_21
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23747..24376)
|
hypothetical protein; K07396 putative protein-disulfide isomerase id=12493835 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
OR_08142018_2_5m_0_2um_scaffold_308_22
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24454..25218)
|
Uncharacterized protein {ECO:0000313|EMBL:KJE39424.1}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas actiniarum.;"
Transcriptional regulator, LuxR family id=4201571 bin=GWC2_Deltaproteobacteria_55_46 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
luxR; transcriptional activator protein LuxR
|
|
OR_08142018_2_5m_0_2um_scaffold_308_23
Methyloglobulus morosus, Methyloglobulus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25368..25868
|
Alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5BNT7_9GAMM
Alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ESS67827.1}; TaxID=1116472 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methyloglobulus.;" source="Methyloglobulus morosus KoM1.;"
hypothetical protein
|
|
OR_08142018_2_5m_0_2um_scaffold_308_24
GWA2_Gallionellales_60_142_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26047..26313
|
Tax=GWA2_Gallionellales_60_142_curated
|
|
OR_08142018_2_5m_0_2um_scaffold_308_25
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26349..26534)
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037046A4
cytochrome oxidase maturation protein cbb3-type
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
OR_08142018_2_5m_0_2um_scaffold_308_26
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26542..26802)
|
cation transporter n=1 Tax=Thiobacillus thioparus RepID=UPI000361CD63
heavy metal translocating P-type ATPase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|