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OR_08142018_2_5m_0_2um_scaffold_371

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_2_5m_0_2um_scaffold_371_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..493
DNA (492bp) protein (164aa)
flagellar biosynthesis protein FlhA n=1 Tax=Thiobacillus thioparus RepID=UPI00035D0976
flagellar biosynthesis protein FlhA
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_371_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

490..1638
DNA (1149bp) protein (383aa)
Flagellar biosynthetic protein FlhF id=1374737 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
flagellar biosynthetic protein FlhF
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_2_5m_0_2um_scaffold_371_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1628..2326
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000360C5ED
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_371_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2319..3029
DNA (711bp) protein (237aa)
flagellar biosynthesis sigma factor n=1 Tax=Thiobacillus thioparus RepID=UPI000376BE13
RNA polymerase sigma-70 factor
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_371_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3110..4327
DNA (1218bp) protein (406aa)
malate dehydrogenase (EC:1.1.1.40)
malate dehydrogenase n=1 Tax=Thiobacillus thioparus RepID=UPI000366945B
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_371_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4387..4767
DNA (381bp) protein (127aa)
succinate dehydrogenase subunit C (EC:1.3.5.1)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000369C200
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_371_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4764..5108
DNA (345bp) protein (115aa)
succinate dehydrogenase subunit D (EC:1.3.5.1)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000379B20E
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_371_8
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5105..6874
DNA (1770bp) protein (590aa)
succinate dehydrogenase subunit A (EC:1.3.5.1)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
succinate dehydrogenase flavoprotein subunit n=1 Tax=Thiobacillus thioparus RepID=UPI0003760C49
OR_08142018_2_5m_0_2um_scaffold_371_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6876..7571
DNA (696bp) protein (232aa)
succinate dehydrogenase subunit B (EC:1.3.5.1)
succinate dehydrogenase iron-sulfur subunit n=1 Tax=Thiobacillus thioparus RepID=UPI000366FC98
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_2_5m_0_2um_scaffold_371_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7579..9132
DNA (1554bp) protein (518aa)
citrate synthase (EC:2.3.3.1)
type II citrate synthase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036C9A23
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_371_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9159..11852
DNA (2694bp) protein (898aa)
sucA; 2-oxoglutarate dehydrogenase E1 (EC:1.2.4.2)
2-oxoglutarate dehydrogenase E1 n=1 Tax=Thiobacillus thioparus RepID=UPI000382C67B
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_371_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11842..12948
DNA (1107bp) protein (369aa)
2-oxoglutarate dehydrogenase E2 (EC:2.3.1.61)
dihydrolipoamide succinyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI0003823152
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_2_5m_0_2um_scaffold_371_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13084..14766
DNA (1683bp) protein (561aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003644CFC
response regulator receiver:tetratricopeptide TPR_4
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_371_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14783..15436
DNA (654bp) protein (218aa)
sensor histidine kinase (EC:2.7.3.-)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000370A87F
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_371_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15487..15915
DNA (429bp) protein (143aa)
ATP-dependent Clp protease adapter protein ClpS id=1335682 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
ATP-dependent Clp protease adaptor protein ClpS
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_371_16
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15916..18171
DNA (2256bp) protein (752aa)
ATP-dependent Clp protease ATP-binding subunit ClpA (EC:3.4.21.92)
ATP-dependent Clp protease, ATP-binding subunit id=1335681 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_371_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18325..18840
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003708CD7
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_2_5m_0_2um_scaffold_371_18
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19353..20774
DNA (1422bp) protein (474aa)
mannose-1-phosphate guanylyltransferase (EC:2.7.7.22)
mannose-1-phosphate guanylyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00037CD054
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_371_19
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21079..21393
DNA (315bp) protein (105aa)
Flagellar transcriptional regulator FlhD n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJG8_THIDA
transcriptional activator FlhD
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_371_20
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21424..21975
DNA (552bp) protein (184aa)
transcriptional activator FlhC; K02402 flagellar transcriptional activator FlhC id=12493987 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
transcriptional activator FlhC
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_371_21
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21994..22755
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037CEF9C
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_2_5m_0_2um_scaffold_371_22
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22883..23200
DNA (318bp) protein (106aa)
flagellar motor protein MotA n=1 Tax=Thiobacillus denitrificans RepID=UPI00037A9490
flagellar motor protein MotA
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying 22 items

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