ggKbase home page

OR_08142018_2_5m_0_2um_scaffold_949

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_2_5m_0_2um_scaffold_949_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..708)
DNA (708bp) protein (236aa)
response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase id=12495513 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_2um_scaffold_949_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(733..2652)
DNA (1920bp) protein (640aa)
histidine kinase (EC:2.7.3.-)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003655789
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_2_5m_0_2um_scaffold_949_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2901..3872
DNA (972bp) protein (324aa)
D-alanyl-D-alanine carboxypeptidase-like protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SMK9_THIDA
D-alanyl-D-alanine carboxypeptidase-like protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_949_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3957..4913
DNA (957bp) protein (319aa)
Putative uncharacterized protein id=1371499 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_949_5
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4910..5788
DNA (879bp) protein (293aa)
2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60)
2-hydroxy-3-oxopropionate reductase {ECO:0000313|EMBL:AAZ96034.1}; EC=1.1.1.60 {ECO:0000313|EMBL:AAZ96034.1};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
tartronate semialdehyde reductase n=1 Tax=Thiobacillus thioparus RepID=UPI00035CEDA4
OR_08142018_2_5m_0_2um_scaffold_949_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5785..6141
DNA (357bp) protein (119aa)
hypothetical protein id=12497673 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_949_7
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6186..6866)
DNA (681bp) protein (227aa)
Transcriptional Regulator, Crp/Fnr family n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SML3_THIDA
Crp/Fnr family transcriptional regulator
Transcriptional Regulator, Crp/Fnr family {ECO:0000313|EMBL:AAZ96032.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_08142018_2_5m_0_2um_scaffold_949_8
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7136..8962
DNA (1827bp) protein (609aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003713727
regulator of nitric oxide reductase transcription
Regulator of nitric oxide reductase transcription {ECO:0000313|EMBL:AAZ96031.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_08142018_2_5m_0_2um_scaffold_949_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9049..10779
DNA (1731bp) protein (577aa)
Nitrite reductase (NO-forming) {ECO:0000313|EMBL:AAZ96030.1}; EC=1.7.2.1 {ECO:0000313|EMBL:AAZ96030.1};; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
nitrite reductase (EC:1.7.2.1)
nitrite reductase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036AE0D5
OR_08142018_2_5m_0_2um_scaffold_949_10
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10797..11165
DNA (369bp) protein (123aa)
cytochrome C55X precursor NirC n=1 Tax=Thiobacillus denitrificans RepID=UPI00036666EE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96029.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_08142018_2_5m_0_2um_scaffold_949_11
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11155..11475
DNA (321bp) protein (107aa)
protein nirF n=1 Tax=Thiobacillus denitrificans RepID=UPI00037A2026
heme d1 biosynthesis protein NirF
Heme d1 biosynthesis protein NirF {ECO:0000313|EMBL:AAZ96028.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Displaying 11 items

View Taxonomy