ggKbase home page

OR_08142018_2_5m_0_2um_scaffold_424_8

Organism: OR_08142018_2_5m_0_2um_Hydrogenophilales_61_29

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 14 / 38 MC: 2
Location: comp(6759..7811)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 82.6
  • Coverage: 316.0
  • Bit_score: 528
  • Evalue 1.00e-147
ribosomal large subunit pseudouridine synthase D n=1 Tax=Thiobacillus thioparus RepID=UPI000364D88F similarity UNIREF
DB: UNIREF100
  • Identity: 84.6
  • Coverage: 325.0
  • Bit_score: 555
  • Evalue 2.10e-155
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 95.4
  • Coverage: 326.0
  • Bit_score: 637
  • Evalue 5.90e-180

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1053
ATGCCGCCCAGCGACCGTTTCAGACCTGGCATCATATTGAATGTAGTAGAACCGGAACAATGTTGCTTAAGCATGGAAAAAGACACAGAAAATTCGTCTGACGATTATAAGGGAATAAGCGAAGACAGCGTTCGCGAGCTGGTGATTCCCAACGAGCAGGGCGGCCAGCGCCTGGATCAGGCCTTGTCGGCCTTGTTGCCGGAGTTTTCGCGCAACCGCATCCAGAACTGGATCCGCGCTCGCAAGATCGAGGTGGACGACGCTTTTCCCTCGACCAAGATGAAGGTTTTTGGCGGTGAATCGGTGCGGGTCGAAATCGATGTCGATCCCAATGCCACGCCGGATGCGCCGGAAGCGATTCCGCTCGATATCGTGCATCAGGATCCCATGCTGCTGGTCGTCAACAAGCCGGTGGGGCTGGTGGTGCATCCGGGCAGCGGAAATCGCAGTGGCACGCTGCTCAATGCGTTGCTGCACTGGGTGCCGCAGGTGGCCGAGCTGCCACGCGCGGGAATCGTGCACCGGCTGGACAAGGACACCTCGGGGCTGCTGGTCGTGGCTAAAACCCTGCCGGCGCATACCGATCTGGTACGTCAGCTGCAGGCGCGTACGGTCAAGCGTGAATACATGGCGCTGGTGTATGGAGAGGTCGATCATGACGGCACTGTCGACGAGCCGCTGGCCCGCGACCCGCACAACCGCACCAAGCGCTGCGTCCACAGCATGGGCAAGCAGGCGATCACGCACTACGAAGTGGTCGAGCGTTTCCCTTCCAATGTCACCTTGTTGCGCTGCAAGCTGGAAACCGGGCGCACGCACCAGATCCGGGTTCACATGCAGCATATCGGCCACCCGCTGGTGGGCGACGCTGTATACAGCGCAAGCCGCCGCAGCCACTTCAAGATCCCGTTCCCGCGCCAGGCGCTGCATGCCGAGCGGCTGGGCCTGATTCATCCCCTGTTCAAGGATCCGGTGCAATGGGAATGCCCGCTGCCCGCCGATTTCGAGTCGCTGCTCGCCGCCCTGCGCGAAGATATTCCCTGGACTGCCTGA
PROTEIN sequence
Length: 351
MPPSDRFRPGIILNVVEPEQCCLSMEKDTENSSDDYKGISEDSVRELVIPNEQGGQRLDQALSALLPEFSRNRIQNWIRARKIEVDDAFPSTKMKVFGGESVRVEIDVDPNATPDAPEAIPLDIVHQDPMLLVVNKPVGLVVHPGSGNRSGTLLNALLHWVPQVAELPRAGIVHRLDKDTSGLLVVAKTLPAHTDLVRQLQARTVKREYMALVYGEVDHDGTVDEPLARDPHNRTKRCVHSMGKQAITHYEVVERFPSNVTLLRCKLETGRTHQIRVHMQHIGHPLVGDAVYSASRRSHFKIPFPRQALHAERLGLIHPLFKDPVQWECPLPADFESLLAALREDIPWTA*