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OR_08142018_2_5m_0_2um_scaffold_424

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_2_5m_0_2um_scaffold_424_1
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(463..729)
DNA (267bp) protein (89aa)
Integrase catalytic region n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GGL3_NITSI
Integrase catalytic subunit
Integrase catalytic region {ECO:0000313|EMBL:AEJ00172.1}; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. (strain Is79A3).;"
OR_08142018_2_5m_0_2um_scaffold_424_2
RLO_Omnitrophica_50_11, Omnitrophica, Bacteria

Not on your lists

comp(787..972)
DNA (186bp) protein (62aa)
Transposase IS3/IS911 family protein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SE92_GALCS
transposase IS3/IS911 family protein
Tax=RIFCSPLOWO2_12_FULL_Omnitrophica_50_11_curated
OR_08142018_2_5m_0_2um_scaffold_424_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1196..3787)
DNA (2592bp) protein (864aa)
protein disaggregation chaperone n=1 Tax=Thiobacillus denitrificans RepID=UPI000362BC24
ClpB protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_424_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3817..4719
DNA (903bp) protein (301aa)
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
nicotinate-nucleotide pyrophosphorylase n=1 Tax=Thiobacillus thioparus RepID=UPI0003682D17
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_424_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4712..5194
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037C3BFF
acetyltransferase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_2_5m_0_2um_scaffold_424_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5182..6027
DNA (846bp) protein (282aa)
DNA ligase (EC:6.5.1.1)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035D065C
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_424_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6031..6741)
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000365AF14
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_424_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6759..7811)
DNA (1053bp) protein (351aa)
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-)
ribosomal large subunit pseudouridine synthase D n=1 Tax=Thiobacillus thioparus RepID=UPI000364D88F
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_424_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7852..8583
DNA (732bp) protein (244aa)
competence protein ComL n=1 Tax=Thiobacillus denitrificans RepID=UPI00036757FD
competence lipoprotein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_424_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8602..8940)
DNA (339bp) protein (113aa)
nitrogen regulatory protein P-II; K04751 nitrogen regulatory protein P-II 1 id=12496955 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
nitrogen regulatory protein P-II
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_424_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8937..10550)
DNA (1614bp) protein (538aa)
NH(3)-dependent NAD(+) synthetase (EC:6.3.1.5); K01950 NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] id=12496954 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
NH(3)-dependent NAD(+) synthetase (EC:6.3.1.5)
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_424_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10561..11436)
DNA (876bp) protein (292aa)
succinyl-CoA synthetase (ADP-forming) subunit alpha (EC:6.2.1.5)
succinyl-CoA synthetase subunit alpha n=1 Tax=Thiobacillus thioparus RepID=UPI00036CB774
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_424_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11433..12593)
DNA (1161bp) protein (387aa)
sucC; succinyl-CoA synthetase subunit beta (EC:6.2.1.5)
malate--CoA ligase subunit beta n=1 Tax=Thiobacillus thioparus RepID=UPI000371A66E
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_2_5m_0_2um_scaffold_424_14
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12599..13795
DNA (1197bp) protein (399aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000364A37B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96757.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_08142018_2_5m_0_2um_scaffold_424_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13934..14827
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003731651
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_424_16
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14903..15904)
DNA (1002bp) protein (334aa)
sodium/hydrogen exchanger n=1 Tax=Thiobacillus thioparus RepID=UPI000380EA18
Ca2+/H+ antiporter
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_2_5m_0_2um_scaffold_424_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16101..16298
DNA (198bp) protein (66aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003657A40
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_424_18
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16295..16750)
DNA (456bp) protein (152aa)
membrane protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037C5C1C
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_2_5m_0_2um_scaffold_424_19
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16762..17370)
DNA (609bp) protein (203aa)
RNase HII (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] id=12493346 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
RNase HII (EC:3.1.26.4)
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_2_5m_0_2um_scaffold_424_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17367..18518)
DNA (1152bp) protein (384aa)
lipid-A-disaccharide synthase (EC:2.4.1.182)
lipid-A-disaccharide synthase n=1 Tax=Thiobacillus thioparus RepID=UPI00036CD801
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_2um_scaffold_424_21
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18518..19294)
DNA (777bp) protein (259aa)
UDP-N-acetylglucosamine acyltransferase (EC:2.3.1.129)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=LPXA_THIDA
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_424_22
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19296..19739)
DNA (444bp) protein (148aa)
3-hydroxyacyl-ACP dehydratase (EC:4.2.1.-)
3-hydroxyacyl-ACP dehydratase n=1 Tax=Thiobacillus denitrificans RepID=UPI000369F25E
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_424_23
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19736..20779)
DNA (1044bp) protein (348aa)
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC:2.3.1.-)
UDP-3-O-acylglucosamine N-acyltransferase id=1350781 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_424_24
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20789..21289)
DNA (501bp) protein (167aa)
Putative outer membrane protein id=1350780 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
outer membrane protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying 24 items

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