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OR_06102018_0_5m_0_1um_scaffold_1088

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_06102018_0_5m_0_1um_scaffold_1088_1
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..257
DNA (255bp) protein (85aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Cytidylate kinase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L0E3_HALNC
cytidylate kinase
OR_06102018_0_5m_0_1um_scaffold_1088_2
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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366..2045
DNA (1680bp) protein (560aa)
30S ribosomal protein S1 n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L0E2_HALNC
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
30S ribosomal protein S1
OR_06102018_0_5m_0_1um_scaffold_1088_3
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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2256..2561
DNA (306bp) protein (102aa)
Integration host factor subunit beta n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L0E1_HALNC
integration host factor subunit beta
Integration host factor subunit beta {ECO:0000256|HAMAP-Rule:MF_00381, ECO:0000256|RuleBase:RU003941}; Short=IHF-beta {ECO:0000256|HAMAP-Rule:MF_00381};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_06102018_0_5m_0_1um_scaffold_1088_4
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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2572..3261
DNA (690bp) protein (230aa)
orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Orotidine 5'-phosphate decarboxylase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L0E0_HALNC
OR_06102018_0_5m_0_1um_scaffold_1088_5
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3366..3863)
DNA (498bp) protein (166aa)
Membrane-bound lytic murein transglycosylase F {ECO:0000256|SAAS:SAAS00176609}; EC=4.-.-.- {ECO:0000256|SAAS:SAAS00276317};; EC=4.2.2.- {ECO:0000256|SAAS:SAAS00276308};; EC=4.2.2.n1 {ECO:0000256|SAAS:SAAS00166192};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Lytic transglycosylase catalytic n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L0D9_HALNC
lytic transglycosylase
OR_06102018_0_5m_0_1um_scaffold_1088_6
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4013..4732)
DNA (720bp) protein (240aa)
Membrane-bound lytic murein transglycosylase F {ECO:0000256|SAAS:SAAS00176609}; EC=4.-.-.- {ECO:0000256|SAAS:SAAS00276317};; EC=4.2.2.- {ECO:0000256|SAAS:SAAS00276308};; EC=4.2.2.n1 {ECO:0000256|SAAS:SAAS00166192};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Lytic transglycosylase catalytic n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L0D9_HALNC
lytic transglycosylase
OR_06102018_0_5m_0_1um_scaffold_1088_7
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4841..5584)
DNA (744bp) protein (248aa)
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; EC=2.1.1.201 {ECO:0000256|HAMAP-Rule:MF_01813};; 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase {ECO:0000256|HAMAP-Rule:MF_01813}; Demethylmenaquinone methyltransferase {ECO:0000256|HAMAP-Rule:MF_01813}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L0D8_HALNC
ubiquinone/menaquinone biosynthesis methyltransferase
OR_06102018_0_5m_0_1um_scaffold_1088_8
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5577..6014)
DNA (438bp) protein (146aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L0D7_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX96160.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_06102018_0_5m_0_1um_scaffold_1088_9
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6024..7364)
DNA (1341bp) protein (447aa)
ATP-dependent protease ATPase subunit HslU n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L0D6_HALNC
heat shock protein HslVU, ATPase HslU
ATP-dependent protease ATPase subunit HslU {ECO:0000256|HAMAP-Rule:MF_00249, ECO:0000256|SAAS:SAAS00089650}; Unfoldase HslU {ECO:0000256|HAMAP-Rule:MF_00249}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_06102018_0_5m_0_1um_scaffold_1088_10
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7361..7900)
DNA (540bp) protein (180aa)
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ATP-dependent protease subunit HslV n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L0D5_HALNC
20S proteasome subunits A and B
OR_06102018_0_5m_0_1um_scaffold_1088_11
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8003..8959)
DNA (957bp) protein (319aa)
Tyrosine recombinase XerC n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L0D4_HALNC
integrase family protein
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_06102018_0_5m_0_1um_scaffold_1088_12
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8956..9681)
DNA (726bp) protein (242aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L0D3_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX96156.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_06102018_0_5m_0_1um_scaffold_1088_13
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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9996..11522
DNA (1527bp) protein (509aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Threonine--tRNA ligase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L0D2_HALNC
threonyl-tRNA synthetase
Displaying 13 items

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