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OR_07112018_10m_0_1um_scaffold_478

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07112018_10m_0_1um_scaffold_478_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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3..572
DNA (570bp) protein (190aa)
glycosyl hydrolase family 109 n=1 Tax=Pedobacter agri RepID=UPI00029A3098
Alpha-N-acetylgalactosaminidase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07112018_10m_0_1um_scaffold_478_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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572..1261
DNA (690bp) protein (230aa)
Aminoglycoside phosphotransferase n=1 Tax=Niabella soli DSM 19437 RepID=H1NM07_9SPHI
aminoglycoside phosphotransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07112018_10m_0_1um_scaffold_478_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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1206..1382
DNA (177bp) protein (59aa)
Aminoglycoside phosphotransferase n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S5Q3_PEDSD
aminoglycoside phosphotransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07112018_10m_0_1um_scaffold_478_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

1379..2707
DNA (1329bp) protein (443aa)
Glycoside hydrolase family 29 (Alpha-L-fucosidase) n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THY1_NIAKG
glycoside hydrolase family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07112018_10m_0_1um_scaffold_478_5
Cellulophaga baltica, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(2715..3725)
DNA (1011bp) protein (337aa)
Pas/pac sensor protein n=1 Tax=Imtechella halotolerans K1 RepID=I0W7K2_9FLAO
histidine kinase
Histidine kinase {ECO:0000313|EMBL:AIZ41351.1}; TaxID=1348584 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga baltica 18.;"
OR_07112018_10m_0_1um_scaffold_478_6
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(3727..4167)
DNA (441bp) protein (147aa)
Chemotaxis protein CheY {ECO:0000313|EMBL:KJS06407.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
response regulator receiver protein id=7718369 bin=BACIGN_2 species=Cellulophaga algicola genus=Cellulophaga taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
CheY-like receiver domain-containing protein
OR_07112018_10m_0_1um_scaffold_478_7
Belliella baltica, Belliella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(4168..6024)
DNA (1857bp) protein (619aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=866536 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Belliella.;" source="Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134).;"
PAS domain S-box n=1 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z7C3_BELBD
PAS domain-containing protein
OR_07112018_10m_0_1um_scaffold_478_8
Indibacter alkaliphilus, Indibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(6036..9899)
DNA (3864bp) protein (1288aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1189612 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae.;" source="Indibacter alkaliphilus LW1.;"
Multi-sensor signal transduction histidine kinase n=1 Tax=Indibacter alkaliphilus LW1 RepID=S2DED2_9BACT
multi-sensor signal transduction histidine kinase
OR_07112018_10m_0_1um_scaffold_478_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

9973..10707
DNA (735bp) protein (245aa)
NIPSNAP family containing protein id=4137102 bin=GWC2_Bacteroidetes_46_850 species=Niabella soli genus=Niabella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
NIPSNAP family containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07112018_10m_0_1um_scaffold_478_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

10729..11115
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B37F82
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07112018_10m_0_1um_scaffold_478_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

11188..15546
DNA (4359bp) protein (1453aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EVM3_EMTOG
heavy metal efflux pump, CzcA family
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07112018_10m_0_1um_scaffold_478_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

15552..16676
DNA (1125bp) protein (375aa)
hemolysin D n=1 Tax=Cytophagales str. B6 RepID=UPI0003B5BE1D
efflux transporter, RND family, MFP subunit
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07112018_10m_0_1um_scaffold_478_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

16704..18242
DNA (1539bp) protein (513aa)
TPR domain-containing protein n=1 Tax=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) RepID=C0QVF2_BRAHW
TPR domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07112018_10m_0_1um_scaffold_478_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

18360..19061
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EAK4_RUNSL
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07112018_10m_0_1um_scaffold_478_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

19074..19799
DNA (726bp) protein (242aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LKN3_CHLTF
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying 15 items

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