ggKbase home page

OR_07112018_10m_0_1um_scaffold_13505

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07112018_10m_0_1um_scaffold_13505_1

Not on your lists

3..587
DNA (585bp) protein (195aa)
Transposase of ISCARN113, ISL3 family n=1 Tax=mine drainage metagenome RepID=E6QWB0_9ZZZZ
Transposase of ISCARN113, ISL3 family {ECO:0000313|EMBL:CBI11533.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
transposase, IS204/IS1001/IS1096/IS1165
OR_07112018_10m_0_1um_scaffold_13505_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(749..1045)
DNA (297bp) protein (99aa)
Sulfoxide reductase heme-binding subunit YedZ id=1347826 bin=GWE1_T_denit_62_9 species=Thiocapsa marina genus=Thiocapsa taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
sulfite oxidase subunit YedZ
Tax=GWE1_Thiobacillus_62_9_curated
OR_07112018_10m_0_1um_scaffold_13505_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1042..1263)
DNA (222bp) protein (74aa)
Sulfoxide reductase heme-binding subunit YedZ id=1347826 bin=GWE1_T_denit_62_9 species=Thiocapsa marina genus=Thiocapsa taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
yedZ; sulfoxide reductase heme-binding subunit YedZ
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_13505_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1263..1901)
DNA (639bp) protein (213aa)
Sulfoxide reductase catalytic subunit YedY id=1347825 bin=GWE1_T_denit_62_9 species=Methylococcus capsulatus genus=Methylococcus taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
sulfite oxidase subunit YedY
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_13505_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1919..2161)
DNA (243bp) protein (81aa)
Sulfoxide reductase catalytic subunit YedY id=1347825 bin=GWE1_T_denit_62_9 species=Methylococcus capsulatus genus=Methylococcus taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_13505_6

Not on your lists

comp(2288..3091)
DNA (804bp) protein (268aa)
Putative transmembrane transcriptional regulator (Anti-sigma factor) n=1 Tax=mine drainage metagenome RepID=E6PRY0_9ZZZZ
Putative transmembrane transcriptional regulator (Anti-sigma factor) {ECO:0000313|EMBL:CBH97686.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
transmembrane anti-sigma factor
OR_07112018_10m_0_1um_scaffold_13505_7

Not on your lists

comp(3084..3551)
DNA (468bp) protein (156aa)
Putative RNA polymerase sigma factor n=1 Tax=mine drainage metagenome RepID=E6PRY1_9ZZZZ
Putative RNA polymerase sigma factor {ECO:0000313|EMBL:CBH97687.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
rpoE8; ECF subfamily RNA polymerase sigma factor
Displaying 7 items

View Taxonomy