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OR_07112018_10m_0_1um_scaffold_2090

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07112018_10m_0_1um_scaffold_2090_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2..445
DNA (444bp) protein (148aa)
Sulfoxide reductase catalytic subunit YedY id=1347825 bin=GWE1_T_denit_62_9 species=Methylococcus capsulatus genus=Methylococcus taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
sulfite oxidase subunit YedY
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_2090_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

445..783
DNA (339bp) protein (113aa)
Sulfoxide reductase heme-binding subunit YedZ id=1347826 bin=GWE1_T_denit_62_9 species=Thiocapsa marina genus=Thiocapsa taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
yedZ; sulfoxide reductase heme-binding subunit YedZ
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_2090_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

780..1016
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000366462A
sulfite oxidase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_2090_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1076..1801)
DNA (726bp) protein (242aa)
flagellar hook-length control protein n=1 Tax=Janthinobacterium lividum RepID=UPI0002894847
Histone protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_2090_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2103..3347)
DNA (1245bp) protein (415aa)
diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase id=1347828 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_2090_6
unknown

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comp(3510..3710)
DNA (201bp) protein (67aa)

This feature has no annotations

OR_07112018_10m_0_1um_scaffold_2090_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3825..4403
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036B88DA
MarR family transcriptional regulator
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_2090_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4519..5265)
DNA (747bp) protein (249aa)
hypothetical protein id=12497868 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_2090_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5262..5816)
DNA (555bp) protein (185aa)
sigma-24 (FecI); K03088 RNA polymerase sigma-70 factor, ECF subfamily id=12497869 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
sigma-24 (FecI)
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_2090_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5950..6405
DNA (456bp) protein (152aa)
hypothetical protein; K09004 hypothetical protein id=12497870 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_2090_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6466..6837
DNA (372bp) protein (124aa)
Putative uncharacterized protein id=1354801 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying 11 items

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