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OR_07112018_10m_0_1um_scaffold_2538

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07112018_10m_0_1um_scaffold_2538_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..425)
DNA (423bp) protein (141aa)
Exodeoxyribonuclease I (EC:3.1.11.1)
exonuclease I n=1 Tax=Curvibacter lanceolatus RepID=UPI0003672851
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_2538_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(430..1170)
DNA (741bp) protein (247aa)
Short-chain dehydrogenase/reductase (SDR) superfamily id=1335133 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
pteridine reductase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_2538_3
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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comp(1183..1701)
DNA (519bp) protein (173aa)
Uncharacterized protein {ECO:0000313|EMBL:KIJ72255.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
OR_07112018_10m_0_1um_scaffold_2538_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1709..2335
DNA (627bp) protein (209aa)
Putative uncharacterized protein id=1335132 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_2538_5
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2437..2790)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Desulfurispirillum indicum (strain ATCC BAA-1389 / S5) RepID=E6W2G3_DESIS
hypothetical protein
Tax=BJP_IG2103_Dechloromonas_60_92
OR_07112018_10m_0_1um_scaffold_2538_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3043..3897)
DNA (855bp) protein (285aa)
Putative uncharacterized protein id=1335131 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_2538_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3906..4367)
DNA (462bp) protein (154aa)
heat-shock protein n=1 Tax=Thiobacillus thioparus RepID=UPI000363074C
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_2538_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4354..5316)
DNA (963bp) protein (321aa)
phosphate starvation protein PhoH n=1 Tax=Thiobacillus denitrificans RepID=UPI0003704840
PhoH-like protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_2538_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5313..6617)
DNA (1305bp) protein (435aa)
(dimethylallyl)adenosine tRNA methylthiotransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00036B3C5B
tRNA-i(6)A37 thiotransferase enzyme MiaB
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_2538_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6772..7326)
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036B443A
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_2538_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7369..8259)
DNA (891bp) protein (297aa)
glutamyl-tRNA synthetase (EC:6.1.1.17)
glutamyl-Q tRNA(Asp) ligase n=1 Tax=Thiobacillus thioparus RepID=UPI00035C8877
Tax=GWE1_Thiobacillus_62_9_curated
OR_07112018_10m_0_1um_scaffold_2538_12

Not on your lists

comp(8340..9527)
DNA (1188bp) protein (396aa)
Glycosyltransferase {ECO:0000313|EMBL:CBI10281.1}; EC=2.4.-.- {ECO:0000313|EMBL:CBI10281.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003654AC8
group 1 glycosyl transferase
OR_07112018_10m_0_1um_scaffold_2538_13
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9572..10204)
DNA (633bp) protein (211aa)
cobalamin-5'-phosphate synthase (EC:2.7.8.26)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000255|HAMAP-Rule:MF_00719}; EC=2.7.8.26 {ECO:0000255|HAMAP-Rule:MF_00719};; Cobalamin synthase {ECO:0000255|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00719}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Cobalamin synthase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=COBS_THIDA
OR_07112018_10m_0_1um_scaffold_2538_14
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10192..10800)
DNA (609bp) protein (203aa)
Alpha-ribazole-5`-phosphate phosphatase CobC, putative n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SFE6_THIDA
alpha-ribazole-5'-phosphate phosphatase
Alpha-ribazole-5`-phosphate phosphatase CobC, putative {ECO:0000313|EMBL:AAZ98664.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_07112018_10m_0_1um_scaffold_2538_15
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10793..11833)
DNA (1041bp) protein (347aa)
cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013344}; Short=NN:DBI PRT {ECO:0000256|HAMAP-Rule:MF_00230};; EC=2.4.2.21 {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013328};; N(1)-alpha-phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SFE5_THIDA
OR_07112018_10m_0_1um_scaffold_2538_16
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11830..12348)
DNA (519bp) protein (173aa)
adenosylcobinamide kinase (EC:2.7.1.156)
Adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SFE4_THIDA
Adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase {ECO:0000313|EMBL:AAZ98666.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_07112018_10m_0_1um_scaffold_2538_17
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12342..13844)
DNA (1503bp) protein (501aa)
cobyric acid synthase (EC:6.3.5.10)
Cobyric acid synthase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SFE3_THIDA
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028, ECO:0000256|SAAS:SAAS00231811}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_07112018_10m_0_1um_scaffold_2538_18
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13841..14806)
DNA (966bp) protein (322aa)
threonine-phosphate decarboxylase (EC:2.6.1.-)
Cobalamin biosynthetic protein CobC n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SFE2_THIDA
Cobalamin biosynthetic protein CobC {ECO:0000313|EMBL:AAZ98668.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_07112018_10m_0_1um_scaffold_2538_19
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14799..14996)
DNA (198bp) protein (66aa)
cobD; cobalamin biosynthesis protein (EC:6.3.1.10)
Cobalamin biosynthesis protein CobD n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SFE1_THIDA
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Displaying 19 items

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