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OR_07112018_10m_0_1um_scaffold_444

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07112018_10m_0_1um_scaffold_444_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..346
DNA (345bp) protein (115aa)
Chaperone protein HtpG id=1341101 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
heat shock protein 90
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_444_2
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

475..801
DNA (327bp) protein (109aa)
Phage-like protein {ECO:0000313|EMBL:GAO34639.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
phage-like
Putative uncharacterized protein id=2184145 bin=GWB2_Nitrospirae_rel_47_37 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
OR_07112018_10m_0_1um_scaffold_444_3
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

794..1120
DNA (327bp) protein (109aa)
Transcriptional regulator, XRE family n=1 Tax=mine drainage metagenome RepID=T0ZP12_9ZZZZ
XRE family transcriptional regulator {ECO:0000313|EMBL:GAO34638.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
helix-turn-helix domain-containing protein
OR_07112018_10m_0_1um_scaffold_444_4
Vibrio cyclitrophicus, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1752..2897
DNA (1146bp) protein (382aa)
hypothetical protein n=1 Tax=Vibrio cyclitrophicus RepID=UPI000312021D
HEAT repeat protein {ECO:0000313|EMBL:ERM57663.1}; TaxID=1136163 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio cyclitrophicus FF75.;"
hypothetical protein
OR_07112018_10m_0_1um_scaffold_444_5
Pseudomonas coronafaciens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2955..3515
DNA (561bp) protein (187aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas syringae pv. oryzae str. 1_6 RepID=F2ZEH5_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EGI00815.1}; TaxID=563797 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas coronafaciens.;" source="Pseudomonas coronafaciens pv. oryzae str. 1_6.;"
hypothetical protein
OR_07112018_10m_0_1um_scaffold_444_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3614..3994
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000366BAA3
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_444_7
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4142..4279)
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P1Q8_AROAE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI08756.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
OR_07112018_10m_0_1um_scaffold_444_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4678..5535
DNA (858bp) protein (286aa)
rRNA (guanine-N1-)-methyltransferase (EC:2.1.1.51); K00563 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] id=12495457 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rRNA (guanine-N1-)-methyltransferase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_444_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5552..5929
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037E4AD6
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_07112018_10m_0_1um_scaffold_444_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6218..6454
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036FB584
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_07112018_10m_0_1um_scaffold_444_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6517..7239
DNA (723bp) protein (241aa)
methyltransferase type 11 id=12497289 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
methyltransferase type 11
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_444_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7255..8616)
DNA (1362bp) protein (454aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003731ECB
response regulator HsfA
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_444_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8616..10121)
DNA (1506bp) protein (502aa)
sensory Transduction Protein Kinase id=12493192 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
sensory transduction protein kinase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_444_14
unknown

Not on your lists

10381..10569
DNA (189bp) protein (63aa)

This feature has no annotations

OR_07112018_10m_0_1um_scaffold_444_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10573..11310
DNA (738bp) protein (246aa)
hypothetical protein id=12497327 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_444_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11467..12951)
DNA (1485bp) protein (495aa)
Ppx/GppA phosphatase (EC:3.6.1.11)
Xopolyphosphatase id=1320596 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
OR_07112018_10m_0_1um_scaffold_444_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12948..14186)
DNA (1239bp) protein (413aa)
membrane protein n=1 Tax=Thiobacillus thioparus RepID=UPI000362516E
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_444_18
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14194..15114)
DNA (921bp) protein (307aa)
CobD/CbiB family protein (EC:6.3.1.10)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000368B46C
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_444_19
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15120..15647)
DNA (528bp) protein (176aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SK00_THIDA
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_444_20
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15830..17428
DNA (1599bp) protein (533aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036EC9CB
response regulator receiver modulated diguanylate cyclase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_444_21
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17425..18174)
DNA (750bp) protein (250aa)
permease n=1 Tax=Thiobacillus denitrificans RepID=UPI000376458D
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_07112018_10m_0_1um_scaffold_444_22
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18192..18503)
DNA (312bp) protein (104aa)
hypothetical protein; K09137 hypothetical protein id=12493197 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_444_23
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18500..18979)
DNA (480bp) protein (160aa)
camphor resistance protein CrcB n=1 Tax=Thiobacillus denitrificans RepID=UPI00036E0F35
camphor resistance protein CrcB
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_444_24
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18943..19602)
DNA (660bp) protein (220aa)
transcriptional regulator n=1 Tax=Thiobacillus thioparus RepID=UPI00036F3835
transcriptional regulator NarL
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_444_25
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19599..21527)
DNA (1929bp) protein (643aa)
Periplasmic Sensor Signal Transduction Histidine Kinase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJ17_THIDA
periplasmic sensor signal transduction histidine kinase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_444_26
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22017..23960
DNA (1944bp) protein (648aa)
nitrous-oxide reductase (EC:1.7.99.6)
nitrous-oxide reductase n=1 Tax=Thiobacillus thioparus RepID=UPI00036E9F3D
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_444_27
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24105..26621
DNA (2517bp) protein (839aa)
transmembrane regulatory NosR transcription regulator protein id=12493663 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
transmembrane regulatory nosR transcription regulator protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_444_28
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26609..27895
DNA (1287bp) protein (429aa)
copper ABC transporter substrate-binding protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036E7AD2
nitrous oxidase accessory protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_444_29
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27867..28121
DNA (255bp) protein (85aa)
ABC transporter related n=1 Tax=Thauera sp. (strain MZ1T) RepID=C4ZN20_THASP
ABC transporter
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying 29 items

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