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OR_07112018_10m_0_1um_scaffold_466

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07112018_10m_0_1um_scaffold_466_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..496)
DNA (495bp) protein (165aa)
Long chain fatty acid transport protein id=1329460 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
long chain fatty acid transport protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_466_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(522..2339)
DNA (1818bp) protein (606aa)
long-chain fatty-acid-CoA ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] id=12496283 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
long-chain fatty-acid-CoA ligase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_466_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2400..3662)
DNA (1263bp) protein (421aa)
Putative tRNA and rRNA cytosine-C5-methylase id=1329458 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
tRNA and rRNA cytosine-C5-methylase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_466_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3749..4177)
DNA (429bp) protein (143aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SFQ3_THIDA
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_466_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4214..5269)
DNA (1056bp) protein (352aa)
hypothetical protein id=12496281 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_466_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5306..6274)
DNA (969bp) protein (323aa)
Putative uncharacterized protein id=1329454 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_466_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6301..7173)
DNA (873bp) protein (291aa)
Protease HtpX homolog id=1329453 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
heat shock protein HtpX
Tax=GWE1_Thiobacillus_62_9_curated
OR_07112018_10m_0_1um_scaffold_466_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7312..8214
DNA (903bp) protein (301aa)
LysR family transcriptional regulator n=1 Tax=Thiobacillus denitrificans RepID=UPI000382A5F5
LysR family transcriptional regulator
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_466_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8218..8655)
DNA (438bp) protein (146aa)
Putative uncharacterized protein id=1329451 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_466_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8648..8995)
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037C1680
thioredoxin-like protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_466_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9077..9484
DNA (408bp) protein (136aa)
Putative uncharacterized protein id=1329449 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_466_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9565..11367
DNA (1803bp) protein (601aa)
high affinity sulfate transporter SulP id=12494923 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
high affinity sulfate transporter SulP
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_466_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11364..11924
DNA (561bp) protein (187aa)
Putative uncharacterized protein id=1331595 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_466_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11934..13595
DNA (1662bp) protein (554aa)
Sulfate permease, SulP family id=1331596 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
SulP family sulfate permease
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_466_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13682..13927)
DNA (246bp) protein (82aa)
transcriptional regulator n=1 Tax=Thiobacillus denitrificans RepID=UPI000364959B
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_466_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14299..14652
DNA (354bp) protein (118aa)
Putative uncharacterized protein id=1331600 bin=GWE1_T_denit_62_9 species=Dechloromonas aromatica genus=Dechloromonas taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_07112018_10m_0_1um_scaffold_466_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14696..15601)
DNA (906bp) protein (302aa)
Putative oxidoreductase protein id=1343290 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
oxidoreductase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_466_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15697..16728
DNA (1032bp) protein (344aa)
ferredoxin n=1 Tax=Thiobacillus thioparus RepID=UPI00036059E7
CDP-6-deoxy-delta-3,4-glucoseen reductase
Tax=GWE1_Thiobacillus_62_9_curated
OR_07112018_10m_0_1um_scaffold_466_19
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16831..18120)
DNA (1290bp) protein (430aa)
hypothetical protein n=1 Tax=Pseudomonas luteola RepID=UPI0002D560EC
hypothetical protein
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG25003.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;"
OR_07112018_10m_0_1um_scaffold_466_20
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18297..18812)
DNA (516bp) protein (172aa)
hypothetical protein id=12495265 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_466_21
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18917..20041)
DNA (1125bp) protein (375aa)
Putative uncharacterized protein id=1343293 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
porphyrin biosynthesis protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_466_22
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20041..21051)
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036B0A5E
uroporphyrin-III C-methyltransferase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_466_23
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21044..21817)
DNA (774bp) protein (258aa)
uroporphyrinogen-III synthase (EC:4.2.1.75)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000372750B
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_466_24
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21814..22737)
DNA (924bp) protein (308aa)
porphobilinogen deaminase (EC:2.5.1.61)
porphobilinogen deaminase n=1 Tax=Thiobacillus denitrificans RepID=UPI00035EDC18
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_466_25
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22828..23325
DNA (498bp) protein (166aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SFT4_THIDA
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_466_26
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23399..24040
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000367D577
LuxR family transcriptional regulator
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_466_27
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24047..25966
DNA (1920bp) protein (640aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003767C33
periplasmic sensor hybrid histidine kinase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_466_28
unknown

Not on your lists

comp(26011..26079)
DNA (69bp) protein (23aa)

This feature has no annotations

Displaying 28 items

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