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OR_07112018_10m_0_1um_scaffold_495

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07112018_10m_0_1um_scaffold_495_1
unknown

Not on your lists

3..365
DNA (363bp) protein (121aa)

This feature has no annotations

OR_07112018_10m_0_1um_scaffold_495_2
unknown

Not on your lists

347..850
DNA (504bp) protein (168aa)

This feature has no annotations

OR_07112018_10m_0_1um_scaffold_495_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1100..1648)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BW38_DELAS
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
OR_07112018_10m_0_1um_scaffold_495_trna_2
unknown

Not on your lists

comp(1811..1897)
DNA (87bp)
transferRNA Ser
OR_07112018_10m_0_1um_scaffold_495_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2143..3534
DNA (1392bp) protein (464aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037A8065
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_495_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3535..4068)
DNA (534bp) protein (178aa)
ADP-ribose pyrophosphatase n=1 Tax=Thiobacillus thioparus RepID=UPI00036E6915
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_495_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4162..4863)
DNA (702bp) protein (234aa)
Probable transmembrane protein id=1342852 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
transmembrane protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_495_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4865..5365)
DNA (501bp) protein (167aa)
Maf-like protein Tbd_1557 id=1360992 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Maf-like protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_495_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5362..7209)
DNA (1848bp) protein (616aa)
pyruvate carboxylase subunit B (EC:4.1.1.3)
Oxaloacetate decarboxylase, alpha subunit id=1360991 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_495_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7213..8631)
DNA (1419bp) protein (473aa)
pyruvate carboxylase subunit A (EC:6.3.4.14)
Acetyl-CoA carboxylase, biotin carboxylase id=1360990 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
OR_07112018_10m_0_1um_scaffold_495_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9251..9430
DNA (180bp) protein (60aa)
50S ribosomal protein L32 n=2 Tax=Neisseriaceae RepID=RL32_CHRVO
rpmF; 50S ribosomal protein L32
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_495_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9557..10546
DNA (990bp) protein (330aa)
phosphate acyltransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003604250
glycerol-3-phosphate acyltransferase PlsX
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_495_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10543..11502
DNA (960bp) protein (320aa)
3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-ACP synthase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003612939
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_495_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11512..12450
DNA (939bp) protein (313aa)
ACP S-malonyltransferase (EC:2.3.1.39)
malonyl CoA-ACP transacylase n=1 Tax=Thiobacillus thioparus RepID=UPI000365BE4B
Tax=GWE1_Thiobacillus_62_9_curated
OR_07112018_10m_0_1um_scaffold_495_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12459..13229
DNA (771bp) protein (257aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-ketoacyl-ACP reductase n=1 Tax=Thiobacillus thioparus RepID=UPI00035F4B51
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_495_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13346..13579
DNA (234bp) protein (78aa)
acyl carrier protein n=1 Tax=Thiobacillus thioparus RepID=UPI000367DC96
acyl carrier protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_495_16
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13608..14840
DNA (1233bp) protein (411aa)
3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SIM5_THIDA
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_495_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14864..16174
DNA (1311bp) protein (437aa)
Anthranilate synthase id=1359358 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_495_18
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16171..16974
DNA (804bp) protein (268aa)
aminodeoxychorismate lyase (EC:4.1.3.38)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003709FC3
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_495_19
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16958..17947
DNA (990bp) protein (330aa)
aminodeoxychorismate lyase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037B1D39
aminodeoxychorismate lyase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_495_20
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17944..18558
DNA (615bp) protein (205aa)
thymidylate kinase (EC:2.7.4.9)
thymidylate kinase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036C32EA
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_495_21
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18555..19538
DNA (984bp) protein (328aa)
DNA polymerase III subunit delta' (EC:2.7.7.7)
DNA polymerase III delta prime subunit id=1348021 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_495_22
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19564..19935
DNA (372bp) protein (124aa)
pilus assembly protein PilZ n=1 Tax=Thiobacillus denitrificans RepID=UPI00035C5A8F
type IV pilus assembly protein PilZ
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_495_23
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20036..20806
DNA (771bp) protein (257aa)
DNAase n=1 Tax=Thiobacillus thioparus RepID=UPI00038283A3
TatD-related deoxyribonuclease
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_495_24
Burkholderia sp. SJ98, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20827..22893)
DNA (2067bp) protein (689aa)
Phosphodiesterase transmembrane protein n=1 Tax=Burkholderia sp. SJ98 RepID=K8REE3_9BURK
Phosphodiesterase transmembrane protein {ECO:0000313|EMBL:EKS69528.1}; TaxID=406819 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. SJ98.;"
hypothetical protein
OR_07112018_10m_0_1um_scaffold_495_25
unknown

Not on your lists

comp(22893..23099)
DNA (207bp) protein (69aa)

This feature has no annotations

OR_07112018_10m_0_1um_scaffold_495_26
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23108..23716)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Herbaspirillum sp. CF444 RepID=J3DLA2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL94331.1}; Flags: Precursor;; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. CF444.;"
hypothetical protein
OR_07112018_10m_0_1um_scaffold_495_27
Herbaspirillum sp. GW103, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23713..24138)
DNA (426bp) protein (142aa)
Protozoan/cyanobacterial globin family protein n=1 Tax=Herbaspirillum sp. GW103 RepID=I3CWC5_9BURK
Protozoan/cyanobacterial globin family protein {ECO:0000313|EMBL:EIJ47918.1}; TaxID=1175306 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. GW103.;"
globin
OR_07112018_10m_0_1um_scaffold_495_28
Methylotenera mobilis, Methylotenera, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24266..25126
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Methylotenera mobilis (strain JLW8 / ATCC BAA-1282 / DSM 17540) RepID=C6WVQ0_METML
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT47999.1}; TaxID=583345 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylotenera.;" source="Methylotenera mobilis (strain JLW8 / ATCC BAA-1282 / DSM 17540).;"
OR_07112018_10m_0_1um_scaffold_495_29
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25149..26258)
DNA (1110bp) protein (370aa)
Chaperone protein DnaJ id=1348026 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
molecular chaperone protein DnaJ
Tax=GWE1_Thiobacillus_62_9_curated
Displaying items 1-30 of 35 in total

View Taxonomy