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OR_07112018_10m_0_1um_scaffold_530

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07112018_10m_0_1um_scaffold_530_1
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..222
DNA (222bp) protein (74aa)
multidrug transporter AcrB n=1 Tax=Thiobacillus thioparus RepID=UPI000370C32B
heavy metal efflux pump CzcA
Tax=RBG_16_Gallionellales_57_15_curated
OR_07112018_10m_0_1um_scaffold_530_2
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

266..703
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000360B240
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97698.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_07112018_10m_0_1um_scaffold_530_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(990..1133)
DNA (144bp) protein (48aa)
transcriptional regulator n=1 Tax=Thiobacillus thioparus RepID=UPI00037656E9
two component heavy metal response transcriptional regulator
Tax=GWE1_Thiobacillus_62_9_curated
OR_07112018_10m_0_1um_scaffold_530_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1331..3187
DNA (1857bp) protein (619aa)
Multi-Cu(II) oxidase CopA id=1351588 bin=GWE1_T_denit_62_9 species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
copper-resistance protein, CopA family protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_07112018_10m_0_1um_scaffold_530_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3238..4296
DNA (1059bp) protein (353aa)
copper resistance protein B id=12497697 bin=THIO_MID species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
copper resistance protein B
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_530_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4358..4864
DNA (507bp) protein (169aa)
blue (type1) copper domain-containing protein id=12497696 bin=THIO_MID species=Caldimonas manganoxidans genus=Caldimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
blue (type1) copper domain-containing protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_07112018_10m_0_1um_scaffold_530_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5044..5382
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036ED810
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_530_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5414..5881
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003725B88
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_530_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5990..6232
DNA (243bp) protein (81aa)
heavy metal translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] id=12498619 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
heavy metal translocating P-type ATPase
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:AAZ98693.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_07112018_10m_0_1um_scaffold_530_10
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6202..6381
DNA (180bp) protein (60aa)
ATPase n=1 Tax=Thiobacillus thioparus RepID=UPI00037EA9F4
heavy metal translocating P-type ATPase
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:AAZ98693.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_07112018_10m_0_1um_scaffold_530_11
unknown

Not on your lists

comp(6470..6724)
DNA (255bp) protein (85aa)

This feature has no annotations

OR_07112018_10m_0_1um_scaffold_530_12
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6783..7577
DNA (795bp) protein (265aa)
ATPase n=1 Tax=Thiobacillus thioparus RepID=UPI00037EA9F4
heavy metal translocating P-type ATPase
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:AAZ98693.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_07112018_10m_0_1um_scaffold_530_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7950..8771)
DNA (822bp) protein (274aa)
Putative uncharacterized protein n=1 Tax=Nitrosomonas sp. AL212 RepID=F9ZI51_9PROT
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_530_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8785..9186)
DNA (402bp) protein (134aa)
Outer membrane transport energization protein ExbD n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6M9_NITMU
biopolymer transport protein ExbD/TolR
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_530_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9173..9820)
DNA (648bp) protein (216aa)
Outer membrane transport energization protein ExbB n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6N0_NITMU
MotA/TolQ/ExbB proton channel
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_530_16
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10018..11220)
DNA (1203bp) protein (401aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
tryptophanyl-tRNA synthetase n=1 Tax=Thiobacillus thioparus RepID=UPI0003757139
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_530_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11261..11965)
DNA (705bp) protein (235aa)
Putative integral membrane transmembrane protein id=1348881 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
integral membrane transmembrane protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_530_18
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11975..12601)
DNA (627bp) protein (209aa)
Putative translation factor Sua5 id=1348882 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
translation factor Sua5
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_530_19
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12618..13469)
DNA (852bp) protein (284aa)
Phosphoesterase PHP id=1348883 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
phosphoesterase PHP
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_530_20
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13600..14241
DNA (642bp) protein (214aa)
Probable intracellular septation protein A id=1348884 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
intracellular septation protein A
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_530_21
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14241..14543
DNA (303bp) protein (101aa)
hypothetical protein; K09780 hypothetical protein id=12497610 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_530_22
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14540..14803
DNA (264bp) protein (88aa)
Putative stress-induced morphogen BolA id=1348886 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
stress-induced morphogen BolA
Tax=GWE1_Thiobacillus_62_9_curated
OR_07112018_10m_0_1um_scaffold_530_23
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14815..15627
DNA (813bp) protein (271aa)
PpiC-type peptidyl-prolyl cis-trans isomerase id=12493080 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
PpiC-type peptidyl-prolyl cis-trans isomerase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_530_24
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15683..15928
DNA (246bp) protein (82aa)
RNA-binding protein Hfq n=1 Tax=Thiobacillus RepID=UPI00037A4DDE
RNA-binding protein Hfq
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_530_25
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15939..17603)
DNA (1665bp) protein (555aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000361616F
glycosyltransferase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_530_26
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17588..18193)
DNA (606bp) protein (202aa)
Membrane protein, putative id=1348030 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_530_27
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18195..18542)
DNA (348bp) protein (116aa)
Glycosyltransferase, group 2 family protein id=1348029 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
group 2 family glycosyl transferase
Tax=GWE1_Thiobacillus_62_9_curated
OR_07112018_10m_0_1um_scaffold_530_28
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19190..20050)
DNA (861bp) protein (287aa)
VacJ-like lipoprotein; K04754 lipoprotein id=12495579 bin=THIO_HI species=unknown genus=unknown taxon_order=unknown taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Membrane protein {ECO:0000313|EMBL:KIO49758.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
VacJ-like lipoprotein
Displaying 28 items

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