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OR_07112018_10m_0_1um_scaffold_701

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07112018_10m_0_1um_scaffold_701_1
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..105
DNA (105bp) protein (35aa)
Integrase catalytic region n=3 Tax=Acidithiobacillus RepID=B5ERY7_ACIF5
integrase catalytic subunit
Integrase catalytic region {ECO:0000313|EMBL:ACH83658.1}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
OR_07112018_10m_0_1um_scaffold_701_2
Ricinus communis, Ricinus, Malpighiales, rosids, Streptophyta, Viridiplantae

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272..1129
DNA (858bp) protein (286aa)
Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9TB43_RICCO
Putative uncharacterized protein {ECO:0000313|EMBL:EEF26921.1}; TaxID=3988 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus.;" source="Ricinus communis (Castor bean).;"
putative nucleoside-triphosphatase
OR_07112018_10m_0_1um_scaffold_701_3
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1141..2457
DNA (1317bp) protein (439aa)
Uncharacterized protein n=2 Tax=Ralstonia pickettii RepID=B2UJB2_RALPJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS64764.1}; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12D).;"
OR_07112018_10m_0_1um_scaffold_701_4

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2462..2755
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T1B9Q8_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD50985.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
OR_07112018_10m_0_1um_scaffold_701_5
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2792..4255)
DNA (1464bp) protein (488aa)
Uncharacterized protein n=1 Tax=Pandoraea sp. RB-44 RepID=V5UND0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KDV22309.1}; Flags: Fragment;; TaxID=1395570 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia JBK9.;"
hypothetical protein
OR_07112018_10m_0_1um_scaffold_701_6
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4252..4734)
DNA (483bp) protein (161aa)
Hypothetical conserved protein n=1 Tax=Rhizobium etli (strain CFN 42 / ATCC 51251) RepID=Q2K2A8_RHIEC
hypothetical protein
Hypothetical conserved protein {ECO:0000313|EMBL:ABC92884.1}; TaxID=347834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CFN 42 / ATCC 51251).;"
OR_07112018_10m_0_1um_scaffold_701_7
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4731..5210)
DNA (480bp) protein (160aa)
Uncharacterized protein {ECO:0000313|EMBL:KDV24817.1}; TaxID=1395570 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia JBK9.;"
OR_07112018_10m_0_1um_scaffold_701_8
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5207..5920)
DNA (714bp) protein (238aa)
Putative uncharacterized protein n=1 Tax=Aquabacterium sp. PL1F5 RepID=B4Y2Z3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KDV24818.1}; TaxID=1395570 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia JBK9.;"
OR_07112018_10m_0_1um_scaffold_701_9
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6216..7283
DNA (1068bp) protein (356aa)
Helix-turn-helix domain protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LUZ7_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
OR_07112018_10m_0_1um_scaffold_701_10
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7290..7775
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LUZ8_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ12166.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
OR_07112018_10m_0_1um_scaffold_701_11
GWA2_Gallionellales_54_124_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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7825..9003
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DGS3_BRAJP
hypothetical protein
Tax=GWA2_Gallionellales_54_124_curated
OR_07112018_10m_0_1um_scaffold_701_trna_1
unknown

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comp(9087..9159)
DNA (73bp)
transferRNA Ala
OR_07112018_10m_0_1um_scaffold_701_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9179..9535)
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035C7EBD
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_701_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9532..10323)
DNA (792bp) protein (264aa)
Prolipoprotein diacylglyceryl transferase id=1343563 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
prolipoprotein diacylglyceryl transferase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_07112018_10m_0_1um_scaffold_701_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10391..13168
DNA (2778bp) protein (926aa)
dihydroxyacid dehydratase (EC:4.2.1.9)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000378D0A3
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_701_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13185..13790
DNA (606bp) protein (202aa)
cobyrinic acid a,c-diamide synthase n=1 Tax=Thiobacillus denitrificans RepID=UPI000368B339
partition-like protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_07112018_10m_0_1um_scaffold_701_16
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13809..14030)
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000369B00C
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_07112018_10m_0_1um_scaffold_701_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(14015..14245)
DNA (231bp) protein (77aa)
Putative uncharacterized protein id=1370721 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_07112018_10m_0_1um_scaffold_701_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14334..16352
DNA (2019bp) protein (673aa)
thioredoxin n=1 Tax=Thiobacillus thioparus RepID=UPI0003622CE7
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_07112018_10m_0_1um_scaffold_701_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16447..17235
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003617475
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_07112018_10m_0_1um_scaffold_701_20
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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17357..17677
DNA (321bp) protein (107aa)
cytochrome C n=1 Tax=Thiobacillus thioparus RepID=UPI00036E0BA7
cytochrome C transmembrane protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_701_21
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17813..18964
DNA (1152bp) protein (384aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037D4D84
extracellular ligand-binding receptor
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_701_22
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18958..21681)
DNA (2724bp) protein (908aa)
DNA helicase/exodeoxyribonuclease V subunit B (EC:3.1.11.5)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000381B286
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_701_23
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21687..22010)
DNA (324bp) protein (108aa)
ferredoxin n=1 Tax=Thiobacillus denitrificans RepID=UPI00037B00A9
7Fe ferredoxin
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_701_24
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22181..22507
DNA (327bp) protein (109aa)
thioredoxin
Thioredoxin id=1350671 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_701_25
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22686..23945
DNA (1260bp) protein (420aa)
rho; transcription termination factor Rho; K03628 transcription termination factor Rho id=12496042 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
rho; transcription termination factor Rho
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_701_26
unknown

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24273..24674
DNA (402bp) protein (134aa)

This feature has no annotations

OR_07112018_10m_0_1um_scaffold_701_27
unknown

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24744..24908
DNA (165bp) protein (55aa)

This feature has no annotations

OR_07112018_10m_0_1um_scaffold_701_28
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25070..26536)
DNA (1467bp) protein (489aa)
gabD1; succinate-semialdehyde dehydrogenase (NADP+) (EC:1.2.1.16)
Putative succinic semialdehyde dehydrogenase id=1371503 bin=GWE1_T_denit_62_9 species=Azoarcus anaerobius genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_701_29
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(26612..27181)
DNA (570bp) protein (190aa)
YceI n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q479L6_DECAR
YceI
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying items 1-30 of 31 in total

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