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OR_07112018_10m_0_1um_scaffold_1223

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07112018_10m_0_1um_scaffold_1223_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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714..1301
DNA (588bp) protein (196aa)
glucokinase (EC:2.7.1.2)
Glucokinase id=1332710 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_1223_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1368..2687
DNA (1320bp) protein (440aa)
glgC; glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase id=1332709 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_1223_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2671..4401
DNA (1731bp) protein (577aa)
Glycosyl hydrolase family 57 id=1332708 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
glycosyl hydrolase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_1223_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4931..5683
DNA (753bp) protein (251aa)
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00035F5118
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_1223_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5680..7890
DNA (2211bp) protein (737aa)
glycogen branching enzyme (EC:2.4.1.18)
glycogen branching protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000362B920
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_1223_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7949..9421
DNA (1473bp) protein (491aa)
Glycogen synthase id=1332705 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
glycogen/starch synthase, ADP-glucose type
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_1223_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9498..11930
DNA (2433bp) protein (811aa)
phosphorylase (EC:2.4.1.1)
glycogen phosphorylase n=1 Tax=Thiobacillus thioparus RepID=UPI000377E969
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_1223_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12056..13303
DNA (1248bp) protein (416aa)
DEAD/DEAH box helicase domain-containing protein id=5083064 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
DEAD/DEAH box helicase domain-containing protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_1223_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13318..13698)
DNA (381bp) protein (127aa)
aspartate alpha-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase id=1340319 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying 9 items

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