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OR_07112018_10m_0_1um_scaffold_1488

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07112018_10m_0_1um_scaffold_1488_1
RIFOXYD1_FULL_Bdellovibrionales_53_11_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(2..436)
DNA (435bp) protein (145aa)
biotin synthase (EC:2.8.1.6)
Biotin synthase id=1362505 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Bdellovibrionales_53_11_curated
OR_07112018_10m_0_1um_scaffold_1488_2
RIFOXYD1_FULL_Bdellovibrionales_53_11_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(429..887)
DNA (459bp) protein (153aa)
Putative uncharacterized protein id=1362506 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYD1_FULL_Bdellovibrionales_53_11_curated
OR_07112018_10m_0_1um_scaffold_1488_3
RIFOXYD1_FULL_Bdellovibrionales_53_11_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

998..1483
DNA (486bp) protein (162aa)
Putative uncharacterized protein id=1362507 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYD1_FULL_Bdellovibrionales_53_11_curated
OR_07112018_10m_0_1um_scaffold_1488_4
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1514..2392)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SCX0_METPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM93409.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
OR_07112018_10m_0_1um_scaffold_1488_5
RIFOXYD1_FULL_Bdellovibrionales_53_11_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(2507..3241)
DNA (735bp) protein (245aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SFA9_THIDA
hypothetical protein
Tax=RIFOXYD1_FULL_Bdellovibrionales_53_11_curated
OR_07112018_10m_0_1um_scaffold_1488_6
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3238..4065)
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI0003737D2E
transmembrane protein
Probable transmembrane protein {ECO:0000313|EMBL:AAZ98704.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_07112018_10m_0_1um_scaffold_1488_7
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4062..6434)
DNA (2373bp) protein (791aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI00036E8295
Uncharacterized protein {ECO:0000313|EMBL:AAZ98703.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
hypothetical protein
OR_07112018_10m_0_1um_scaffold_1488_8
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6463..7044)
DNA (582bp) protein (194aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SFB2_THIDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ98702.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_07112018_10m_0_1um_scaffold_1488_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7041..8210)
DNA (1170bp) protein (390aa)
Putative lauroyl/myristoyl acyltransferase involved in LPS biosynthesis n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SFB3_THIDA
lauroyl/myristoyl acyltransferase
Putative lauroyl/myristoyl acyltransferase involved in LPS biosynthesis {ECO:0000313|EMBL:AAZ98701.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_07112018_10m_0_1um_scaffold_1488_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8207..9523)
DNA (1317bp) protein (439aa)
CoA ligase id=12493253 bin=THIO_HI species=Lamprocystis purpurea genus=Lamprocystis taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
CoA ligase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_1488_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9547..10221)
DNA (675bp) protein (225aa)
Transmembrane protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SER4_THIDA
transmembrane protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_1488_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10232..10531)
DNA (300bp) protein (100aa)
acyl carrier protein; K02078 acyl carrier protein id=12493251 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
acyl carrier protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_1488_13
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10625..11227)
DNA (603bp) protein (201aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SFB6_THIDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ98696.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_07112018_10m_0_1um_scaffold_1488_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11395..11607
DNA (213bp) protein (71aa)
30S ribosomal protein S21 n=1 Tax=Thiobacillus denitrificans RepID=UPI000360CC15
rpsU; 30S ribosomal protein S21
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_1488_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11639..12085
DNA (447bp) protein (149aa)
aspartyl-tRNA amidotransferase subunit B n=1 Tax=Thiobacillus thioparus RepID=UPI00036783EB
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_1488_16
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12138..13838
DNA (1701bp) protein (567aa)
DNA primase (EC:2.7.7.-)
DNA primase id=1320210 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_1488_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13952..15889
DNA (1938bp) protein (646aa)
RNA polymerase sigma factor id=1320209 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
carbamoyl-phosphate synthase L chain, ATP-binding
Tax=GWE1_Thiobacillus_62_9_curated
OR_07112018_10m_0_1um_scaffold_1488_trna_1
unknown

Not on your lists

15914..15987
DNA (74bp)
transferRNA Met
OR_07112018_10m_0_1um_scaffold_1488_18
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16065..17429
DNA (1365bp) protein (455aa)
adenine-specific DNA-methyltransferase (EC:2.1.1.72)
Nucleotidyltransferase substrate binding protein, HI0074 family n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IWQ0_9GAMM
Type I restriction-modification protein subunit M {ECO:0000313|EMBL:KJC62040.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
OR_07112018_10m_0_1um_scaffold_1488_19
R_RIF_OD1_09_49_22, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

17426..18583
DNA (1158bp) protein (386aa)
Restriction modification system DNA specificity domain n=1 Tax=Acidithiobacillus ferrooxidans (strain ATCC 53993) RepID=B5EKM3_ACIF5
restriction modification system DNA specificity protein
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_09_49_22_curated
OR_07112018_10m_0_1um_scaffold_1488_20
Pseudomonas brassicacearum, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18703..18801
DNA (99bp) protein (33aa)
Uncharacterized protein n=1 Tax=uncultured prokaryote RepID=M1GLT6_9ZZZZ
addiction module antitoxin
Addiction module antitoxin {ECO:0000313|EMBL:AHL34652.1}; TaxID=930166 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas brassicacearum.;"
Displaying 21 items

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