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OR_07112018_10m_0_1um_scaffold_1674

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07112018_10m_0_1um_scaffold_1674_1
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..302)
DNA (300bp) protein (100aa)
Putative 5'-nucleotidase/2' 3'-cyclic phosphodiesterase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJC5_THIDA
5'-nucleotidase {ECO:0000313|EMBL:GAO37203.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
5'-nucleotidase/2' 3'-cyclic phosphodiesterase
OR_07112018_10m_0_1um_scaffold_1674_2
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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465..1151
DNA (687bp) protein (229aa)
Two component Transcriptional regulator, Winged helix family n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJC4_THIDA
two component transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
OR_07112018_10m_0_1um_scaffold_1674_3
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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1148..1942
DNA (795bp) protein (265aa)
Periplasmic Sensor Signal Transduction Histidine Kinase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9K2_9PROT
periplasmic Sensor Signal Transduction Histidine Kinase
Tax=RBG_16_Gamma2_65_34_curated
OR_07112018_10m_0_1um_scaffold_1674_4
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1909..2421
DNA (513bp) protein (171aa)
Integral membrane sensor signal transduction histidine kinase id=1308716 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
periplasmic sensor signal transduction histidine kinase
Tax=GWE1_Burkholderiales_65_30_curated
OR_07112018_10m_0_1um_scaffold_1674_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2645..4033
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFN5_9PROT
phosphatase-like
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_1674_6

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comp(4536..5093)
DNA (558bp) protein (186aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2G3C9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE17675.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
OR_07112018_10m_0_1um_scaffold_1674_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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5886..6467
DNA (582bp) protein (194aa)
hypothetical protein id=12498221 bin=THIO_MID species=Acidithiobacillus caldus genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_1674_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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6472..7704
DNA (1233bp) protein (411aa)
hypothetical protein id=12498222 bin=THIO_MID species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_1674_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7806..8087
DNA (282bp) protein (94aa)
id=12498223 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_1674_10
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8429..10501)
DNA (2073bp) protein (691aa)
TonB-dependent receptor:TonB box, N-terminal n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47H81_DECAR
TonB-dependent receptor:TonB box, N-terminal
Tax=BJP_IG2103_Dechloromonas_63_51
OR_07112018_10m_0_1um_scaffold_1674_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10822..11577)
DNA (756bp) protein (252aa)
heme biosynthesis protein HemY n=1 Tax=Thiobacillus denitrificans RepID=UPI00035E015E
HesA/MoeB/ThiF family protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_1674_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11594..11794
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037CACEF
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_1674_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11791..12351
DNA (561bp) protein (187aa)
Transcription elongation factor GreA id=1320893 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
greB; transcription elongation factor GreB
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_1674_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12432..13274)
DNA (843bp) protein (281aa)
thioredoxin n=1 Tax=Thiobacillus denitrificans RepID=UPI0003734526
thioredoxin
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_1674_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13287..14657)
DNA (1371bp) protein (457aa)
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase id=1320896 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
OR_07112018_10m_0_1um_scaffold_1674_16
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14688..15281)
DNA (594bp) protein (198aa)
recombinase RecR n=1 Tax=Thiobacillus thioparus RepID=UPI00036195E5
recR; recombination protein RecR
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_1674_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15294..15620)
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036D7504
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_1674_18
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15617..17371)
DNA (1755bp) protein (585aa)
DNA polymerase subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III subunit gamma/tau n=1 Tax=Thiobacillus denitrificans RepID=UPI000382462D
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_1674_19
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17499..18575)
DNA (1077bp) protein (359aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase id=1320900 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_1674_20
unknown

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comp(19510..19707)
DNA (198bp) protein (66aa)

This feature has no annotations

OR_07112018_10m_0_1um_scaffold_1674_21
unknown

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comp(20542..21207)
DNA (666bp) protein (222aa)

This feature has no annotations

OR_07112018_10m_0_1um_scaffold_1674_22
unknown

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comp(21496..22260)
DNA (765bp) protein (255aa)

This feature has no annotations

OR_07112018_10m_0_1um_scaffold_1674_23
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22797..23525
DNA (729bp) protein (243aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SKD5_THIDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96850.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_07112018_10m_0_1um_scaffold_1674_24
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23710..23805)
DNA (96bp) protein (32aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SK23_THIDA
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying 24 items

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