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OR_07232018_dam_0_1um_scaffold_144

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07232018_dam_0_1um_scaffold_144_1
unknown

Not on your lists

comp(3..62)
DNA (60bp) protein (20aa)

This feature has no annotations

OR_07232018_dam_0_1um_scaffold_144_2
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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344..1942
DNA (1599bp) protein (533aa)
2-aminoadipate transaminase {ECO:0000313|EMBL:CDW93943.1}; EC=2.6.1.39 {ECO:0000313|EMBL:CDW93943.1};; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
Putative transcriptional regulator, GntR family n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6Y3_THIK1
GntR family transcriptional regulator
OR_07232018_dam_0_1um_scaffold_144_3
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2006..2479)
DNA (474bp) protein (158aa)
Cytochrome c n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CN07_THIA3
Cytochrome c'
Cytochrome c {ECO:0000313|EMBL:CDW93941.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
OR_07232018_dam_0_1um_scaffold_144_4
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2896..3195
DNA (300bp) protein (100aa)
SWIB/MDM2 domain protein n=2 Tax=Thiomonas RepID=D5X6Y5_THIK1
SWIB/MDM2 domain protein {ECO:0000313|EMBL:CDW93940.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
SWIB/MDM2 domain-containing protein
OR_07232018_dam_0_1um_scaffold_144_5
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3299..3895
DNA (597bp) protein (199aa)
putative Phospholipase D (EC:3.1.4.4)
Putative Phospholipase D {ECO:0000313|EMBL:CAZ89937.1}; EC=3.1.4.4 {ECO:0000313|EMBL:CAZ89937.1};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Putative Phospholipase D n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CN09_THIA3
OR_07232018_dam_0_1um_scaffold_144_6
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3997..4533
DNA (537bp) protein (179aa)
Redoxin domain protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6Y7_THIK1
redoxin domain-containing protein
Redoxin domain protein {ECO:0000313|EMBL:ADG32134.1}; Flags: Precursor;; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_144_7
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4552..5457)
DNA (906bp) protein (302aa)
Transcriptional regulator, LysR family n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6Y8_THIK1
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADG32135.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_144_8
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5645..7231
DNA (1587bp) protein (529aa)
malate synthase A (EC:2.3.3.9)
Malate synthase {ECO:0000256|RuleBase:RU000555}; EC=2.3.3.9 {ECO:0000256|RuleBase:RU000555};; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
Malate synthase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6Y9_THIK1
OR_07232018_dam_0_1um_scaffold_144_9
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7315..8520
DNA (1206bp) protein (402aa)
Diguanylate cyclase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6Z0_THIK1
diguanylate cyclase
Uncharacterized protein {ECO:0000313|EMBL:CDW93935.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
OR_07232018_dam_0_1um_scaffold_144_10
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8697..9386
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CN15_THIA3
conserved hypothetical protein putative RmlC-like cupin
Uncharacterized protein {ECO:0000313|EMBL:CDW93932.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
OR_07232018_dam_0_1um_scaffold_144_11
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9538..10140
DNA (603bp) protein (201aa)
Zinc uptake regulation protein (Zinc uptake regulator) n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CN16_THIA3
Zinc uptake regulation protein {ECO:0000313|EMBL:CDW93930.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
zur; Zinc uptake regulation protein (Zinc uptake regulator)
OR_07232018_dam_0_1um_scaffold_144_12
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10142..10597)
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=2 Tax=Thiomonas RepID=D5X6Z4_THIK1
putative Permease of the major facilitator superfamily
Uncharacterized protein {ECO:0000313|EMBL:ADG32141.1}; Flags: Precursor;; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_144_13
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10691..11653)
DNA (963bp) protein (321aa)
lipoic acid synthetase (EC:2.8.1.8)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206, ECO:0000313|EMBL:CAZ89946.1};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic acid synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Sulfur insertion protein LipA {ECO:0000256|HAMAP-Rule:MF_00206}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Lipoyl synthase n=2 Tax=Thiomonas RepID=D5X6Z5_THIK1
OR_07232018_dam_0_1um_scaffold_144_14
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11676..12341)
DNA (666bp) protein (222aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000256|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:0000256|HAMAP-Rule:MF_00013}; Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
lipB; Lipoyltransferase (Lipoyl-[acyl-carrier protein]-protein-N-lipoyltransferase) (Lipoate-protein ligase B) (EC:2.3.1.181)
Octanoyltransferase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CN19_THIA3
OR_07232018_dam_0_1um_scaffold_144_15
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12392..13081
DNA (690bp) protein (230aa)
Putative S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CN20_THIA3
putative S-adenosyl-L-methionine-dependent methyltransferase
Methyltransferase type 12 {ECO:0000313|EMBL:ADG32144.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_144_16
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13237..13401
DNA (165bp) protein (55aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6Z8_THIK1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG32145.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_144_17
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13413..14027)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CN22_THIA3
conserved hypothetical protein putative cAMP-binding protein
Uncharacterized protein {ECO:0000313|EMBL:CAZ89950.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_144_18
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14223..16949
DNA (2727bp) protein (909aa)
methionine synthase (EC:2.1.1.13)
Methionine synthase {ECO:0000313|EMBL:ADG32147.1}; EC=2.1.1.13 {ECO:0000313|EMBL:ADG32147.1};; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
Methionine synthase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X700_THIK1
OR_07232018_dam_0_1um_scaffold_144_19

Not on your lists

comp(17264..20383)
DNA (3120bp) protein (1040aa)
Putative Acriflavin resistance protein n=1 Tax=mine drainage metagenome RepID=E6PVI5_9ZZZZ
Putative Acriflavin resistance protein {ECO:0000313|EMBL:CBH98942.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
putative Acriflavin resistance protein
OR_07232018_dam_0_1um_scaffold_144_20
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20398..21582)
DNA (1185bp) protein (395aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X702_THIK1
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:CDW93911.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
putative Secretion protein HlyD
OR_07232018_dam_0_1um_scaffold_144_21
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21637..23190)
DNA (1554bp) protein (518aa)
Putative RND efflux system outer membrane lipoprotein NodT n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CN26_THIA3
putative RND efflux system outer membrane lipoprotein NodT
Putative RND efflux system outer membrane lipoprotein NodT {ECO:0000313|EMBL:CAZ89954.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_144_22
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23439..24323
DNA (885bp) protein (295aa)
Transcriptional regulator, AraC family n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X704_THIK1
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ADG32151.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_144_23
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24422..25699
DNA (1278bp) protein (426aa)
O-acetylhomoserine/O-acetylserine sulfhydrylase (EC:2.5.1.47)
O-acetylhomoserine/O-acetylserine sulfhydrylase {ECO:0000313|EMBL:ADG32152.1}; EC=2.5.1.47 {ECO:0000313|EMBL:ADG32152.1};; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
O-acetylhomoserine/O-acetylserine sulfhydrylase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X705_THIK1
OR_07232018_dam_0_1um_scaffold_144_24
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25906..26679
DNA (774bp) protein (258aa)
17 kDa surface antigen n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X706_THIK1
17 kDa surface antigen {ECO:0000313|EMBL:CDW93904.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
17 kDa surface antigen
OR_07232018_dam_0_1um_scaffold_144_25
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27355..27855
DNA (501bp) protein (167aa)
Putative NUDIX hydrolase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CN43_THIA3
putative NUDIX hydrolase
Putative NUDIX hydrolase {ECO:0000313|EMBL:CAZ89971.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_144_26
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27869..28702
DNA (834bp) protein (278aa)
Endonuclease/exonuclease/phosphatase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WYJ1_THIK1
endonuclease/exonuclease/phosphatase
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:ADG32168.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_144_27
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28699..30087
DNA (1389bp) protein (463aa)
Cardiolipin synthase B {ECO:0000256|HAMAP-Rule:MF_01917}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01917};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01917};; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
Phospholipase D/Transphosphatidylase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WYJ2_THIK1
phospholipase D/transphosphatidylase
OR_07232018_dam_0_1um_scaffold_144_28
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30206..31450)
DNA (1245bp) protein (415aa)
Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WYJ3_THIK1
PAS/PAC sensor-containing diguanylate cyclase
Diguanylate cyclase with PAS/PAC sensor {ECO:0000313|EMBL:ADG32170.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_144_29
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31685..32710
DNA (1026bp) protein (342aa)
Rhodanese domain protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WYJ4_THIK1
rhodanese domain-containing protein
Rhodanese domain protein {ECO:0000313|EMBL:ADG32171.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_144_30
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32695..33846
DNA (1152bp) protein (384aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WYJ5_THIK1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG32172.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
Displaying items 1-30 of 47 in total

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