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OR_07232018_dam_0_1um_scaffold_299

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07232018_dam_0_1um_scaffold_299_1
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..705)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CPD2_THIA3
conserved hypothetical protein; putative GGDEF domain
Uncharacterized protein {ECO:0000313|EMBL:CAZ87862.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_299_2
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(806..1864)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Acinetobacter baumannii NIPH 329 RepID=N9II86_ACIBA
acyltransferase
Tax=GWF2_Bacteroidetes_43_11_curated
OR_07232018_dam_0_1um_scaffold_299_3
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1933..2655)
DNA (723bp) protein (241aa)
putative ABC-type branched-chain amino acid transport system, ATPase component (EC:3.6.3.19)
ABC transporter related protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WYX2_THIK1
ABC transporter related protein {ECO:0000313|EMBL:ADG30310.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_299_4
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2652..3368)
DNA (717bp) protein (239aa)
ABC transporter related protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WYX3_THIK1
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADG30311.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_299_5
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3358..4293)
DNA (936bp) protein (312aa)
Putative ABC-type branched-chain amino acid transport system, permease component n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CPD5_THIA3
Putative ABC-type branched-chain amino acid transport system, permease component {ECO:0000313|EMBL:CDW94777.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
putative ABC-type branched-chain amino acid transport system, permease component
OR_07232018_dam_0_1um_scaffold_299_6
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4286..5167)
DNA (882bp) protein (294aa)
Putative ABC-type branched-chain amino acid transport system, permease component n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CPD6_THIA3
putative ABC-type branched-chain amino acid transport system, permease component
Putative ABC-type branched-chain amino acid transport system, permease component {ECO:0000313|EMBL:CDW94778.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
OR_07232018_dam_0_1um_scaffold_299_7
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5237..6484)
DNA (1248bp) protein (416aa)
Putative ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CPD7_THIA3
putative ABC-type branched-chain amino acid transport system, periplasmic component
Putative ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:CAZ87867.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_299_8
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7275..7910
DNA (636bp) protein (212aa)
upp; uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
Uracil phosphoribosyltransferase n=2 Tax=Thiomonas RepID=D5WYX8_THIK1
OR_07232018_dam_0_1um_scaffold_299_9

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comp(8175..8597)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PU76_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBH98483.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
OR_07232018_dam_0_1um_scaffold_299_10

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comp(8667..9014)
DNA (348bp) protein (116aa)
Putative transcriptional regulator n=1 Tax=mine drainage metagenome RepID=E6PU77_9ZZZZ
Putative transcriptional regulator {ECO:0000313|EMBL:CBH98484.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
regulatory protein ArsR
OR_07232018_dam_0_1um_scaffold_299_11

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comp(9011..10051)
DNA (1041bp) protein (347aa)
Putative Permease of the major facilitator superfamily n=1 Tax=mine drainage metagenome RepID=E6PU78_9ZZZZ
Putative Permease of the major facilitator superfamily {ECO:0000313|EMBL:CBH98485.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
OR_07232018_dam_0_1um_scaffold_299_12
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10238..11557
DNA (1320bp) protein (440aa)
Pyrimidine transporter n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CPE0_THIA3
rutG; pyrimidine transporter
Pyrimidine transporter {ECO:0000313|EMBL:CAZ87870.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_299_13
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11657..12097
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CPE1_THIA3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAZ87871.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_299_14
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12125..13411)
DNA (1287bp) protein (429aa)
Molybdopterin molybdenumtransferase {ECO:0000313|EMBL:CDW94788.1}; EC=2.10.1.1 {ECO:0000313|EMBL:CDW94788.1};; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
Molybdopterin biosynthesis protein moeA n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CPE2_THIA3
moeA1; Molybdopterin biosynthesis protein moeA
OR_07232018_dam_0_1um_scaffold_299_15
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(13408..14013)
DNA (606bp) protein (202aa)
Molybdenum cofactor guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316, ECO:0000256|SAAS:SAAS00049907}; Short=MoCo guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316};; EC=2.7.7.77 {ECO:0000256|HAMAP-Rule:MF_00316, ECO:0000256|SAAS:SAAS00049907};; GTP:molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Mo-MPT guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin-guanine dinucleotide synthase {ECO:0000256|HAMAP-Rule:MF_00316}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Molybdenum cofactor guanylyltransferase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CPE3_THIA3
putative molybdopterin-guanine dinucleotide synthase protein A MobA
OR_07232018_dam_0_1um_scaffold_299_16
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(14015..14356)
DNA (342bp) protein (114aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WYY3_THIK1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG30321.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_299_17
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(14367..14753)
DNA (387bp) protein (129aa)
Putative prokaryotic DksA/TraR C4 type n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CPE5_THIA3
putative prokaryotic DksA/TraR C4 type
Putative prokaryotic DksA/TraR C4 type {ECO:0000313|EMBL:CAZ87875.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_299_18
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14841..16379)
DNA (1539bp) protein (513aa)
Putative virulence factor MviN family n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CPE6_THIA3
putative virulence factor MviN family
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
OR_07232018_dam_0_1um_scaffold_299_19
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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16493..16789
DNA (297bp) protein (99aa)
30S ribosomal protein S20 n=2 Tax=Thiomonas RepID=D5WYY6_THIK1
rpsT; Ribosomal protein S20
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_299_20
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16982..17383)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CPE8_THIA3
Uncharacterized protein {ECO:0000313|EMBL:CDW94797.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
hypothetical protein
OR_07232018_dam_0_1um_scaffold_299_21
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17618..18826
DNA (1209bp) protein (403aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
acetylornithine and succinylornithine aminotransferase (EC:2.6.1.11)
Acetylornithine aminotransferase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WYY8_THIK1
OR_07232018_dam_0_1um_scaffold_299_22
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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18842..19777
DNA (936bp) protein (312aa)
argF; ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase, catabolic {ECO:0000256|HAMAP-Rule:MF_01109}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000313|EMBL:CAZ87880.1};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Ornithine carbamoyltransferase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) PF0_THIA3">RepID=D6CPF0_THIA3
OR_07232018_dam_0_1um_scaffold_299_23

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19861..20937
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PL03_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBH95604.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
OR_07232018_dam_0_1um_scaffold_299_24
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20938..21255)
DNA (318bp) protein (106aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WYZ1_THIK1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG30329.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_299_25
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21252..22217)
DNA (966bp) protein (322aa)
putative GTPase EngC (EC:3.6.1.-)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) PF3_THIA3">RepID=D6CPF3_THIA3
OR_07232018_dam_0_1um_scaffold_299_26
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22226..22453)
DNA (228bp) protein (76aa)
putative pterin-4-alpha-carbinolamine dehydratase (PHS) (4-alpha-hydroxy-tetrahydropterin dehydratase) (Pterin carbinolamine dehydratase) (PCD) (EC:4.2.1.96)
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000256|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000256|HAMAP-Rule:MF_00434, ECO:0000313|EMBL:CAZ87884.1};; 4-alpha-hydroxy-tetrahydropterin dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Pterin carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Putative pterin-4-alpha-carbinolamine dehydratase n=2 Tax=Thiomonas RepID=D5WYZ3_THIK1
Displaying 26 items

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