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OR_07232018_dam_0_1um_scaffold_377

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07232018_dam_0_1um_scaffold_377_1
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..1230)
DNA (1230bp) protein (410aa)
Putative two-component sensor histidine kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:CAZ87416.1};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Putative two-component sensor histidine kinase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CS25_THIA3
OR_07232018_dam_0_1um_scaffold_377_2
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1227..1949)
DNA (723bp) protein (241aa)
Transcriptional regulatory protein ompR n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CS26_THIA3
ompR1; Transcriptional regulatory protein ompR
Transcriptional regulatory protein ompR {ECO:0000313|EMBL:CAZ87417.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_377_3
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2169..2690
DNA (522bp) protein (174aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WZJ9_THIK1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG32397.1}; Flags: Precursor;; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_377_4
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2796..3029
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CS28_THIA3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAZ87419.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_377_5
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3248..4330)
DNA (1083bp) protein (361aa)
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {ECO:0000256|HAMAP-Rule:MF_01270}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X2Z3_THIK1
hypothetical protein
OR_07232018_dam_0_1um_scaffold_377_6
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4353..5747)
DNA (1395bp) protein (465aa)
putative Peptidase M23B (EC:3.4.24.75 3.4.24.-)
Putative Peptidase M23B {ECO:0000313|EMBL:CAZ86852.1}; EC=3.4.24.- {ECO:0000313|EMBL:CAZ86852.1};; EC=3.4.24.75 {ECO:0000313|EMBL:CAZ86852.1};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Putative Peptidase M23B n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CKD9_THIA3
OR_07232018_dam_0_1um_scaffold_377_7
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5740..7158)
DNA (1419bp) protein (473aa)
putative Peptidase M23B (EC:3.4.24.75 3.4.24.-)
Putative Peptidase M23B {ECO:0000313|EMBL:CAZ86851.1}; EC=3.4.24.- {ECO:0000313|EMBL:CAZ86851.1};; EC=3.4.24.75 {ECO:0000313|EMBL:CAZ86851.1};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Putative Peptidase M23B n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CKD8_THIA3
OR_07232018_dam_0_1um_scaffold_377_8
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7326..8687
DNA (1362bp) protein (454aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02007}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
Tyrosine--tRNA ligase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X2Z0_THIK1
tyrosyl-tRNA synthetase
OR_07232018_dam_0_1um_scaffold_377_9
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8766..9011)
DNA (246bp) protein (82aa)
Transglycosylase-associated protein n=2 Tax=Thiomonas RepID=D5X2Y9_THIK1
conserved hypothetical protein (Transglycosylase-associated gene protein)
Transglycosylase-associated protein {ECO:0000313|EMBL:ADG29487.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_377_10
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9079..11955)
DNA (2877bp) protein (959aa)
UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A) n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CKD5_THIA3
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
uvrA; UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A)
OR_07232018_dam_0_1um_scaffold_377_11
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12284..13498
DNA (1215bp) protein (405aa)
Permease of the major facilitator superfamily n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CKD4_THIA3
yajR; Permease of the major facilitator superfamily
Permease of the major facilitator superfamily {ECO:0000313|EMBL:CAZ86847.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_377_12
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13590..14069
DNA (480bp) protein (160aa)
Single-stranded DNA-binding protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X2Y7_THIK1
single-strand binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_377_13
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14123..14776)
DNA (654bp) protein (218aa)
Methyltransferase type 11 n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X2Y0_THIK1
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ADG29478.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_377_14
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14815..15264)
DNA (450bp) protein (150aa)
OsmC family protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X2X9_THIK1
OsmC family protein
OsmC family protein {ECO:0000313|EMBL:ADG29477.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_377_15
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15413..17182
DNA (1770bp) protein (590aa)
ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X2X8_THIK1
Putative ABC-type Xenobiotic transport system, ATPase and permease component {ECO:0000313|EMBL:CDW93353.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
cysteine ABC transporter ATP-binding protein/permease
OR_07232018_dam_0_1um_scaffold_377_16
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17179..18771
DNA (1593bp) protein (531aa)
ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X2X7_THIK1
cysteine ABC transporter ATP-binding protein/permease
ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC {ECO:0000313|EMBL:ADG29475.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
Displaying 16 items

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