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OR_07232018_dam_0_1um_scaffold_425

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07232018_dam_0_1um_scaffold_425_1
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..349)
DNA (348bp) protein (116aa)
TonB family protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1V7_THIK1
TonB family protein
TonB family protein {ECO:0000313|EMBL:ADG31103.1}; Flags: Precursor;; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_425_2
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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562..1713
DNA (1152bp) protein (384aa)
carA; Carbamoyl-phosphate synthase small chain (Carbamoyl-phosphate synthetase glutamine chain) (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209, ECO:0000313|EMBL:CAZ88806.1};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Carbamoyl-phosphate synthase small chain n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CU37_THIA3
OR_07232018_dam_0_1um_scaffold_425_3
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1729..2412
DNA (684bp) protein (228aa)
Lysine exporter protein (LYSE/YGGA) n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1V5_THIK1
lysine exporter protein LysE/YggA
Lysine exporter protein (LYSE/YGGA) {ECO:0000313|EMBL:ADG31101.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_425_4
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2449..5673
DNA (3225bp) protein (1075aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
Carbamoyl-phosphate synthase large chain n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1V4_THIK1
carbamoyl-phosphate synthase large subunit
OR_07232018_dam_0_1um_scaffold_425_5
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5750..6223
DNA (474bp) protein (158aa)
Transcription elongation factor GreA n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1V3_THIK1
GreA/GreB family elongation factor
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; Flags: Precursor;; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_425_6
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6220..6642
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CU33_THIA3
conserved hypothetical protein; putative exported protein
Uncharacterized protein {ECO:0000313|EMBL:ADG31098.1}; Flags: Precursor;; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_425_7
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6664..7155)
DNA (492bp) protein (164aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1V1_THIK1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG31097.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_425_8
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7232..7882
DNA (651bp) protein (217aa)
putative Ribosomal RNA large subunit methyltransferase J (rRNA (uridine-2'-O-)-methyltransferase) (23S rRNA m2U2552 methyltransferase) (Cell division protein ftsJ) (EC:2.1.1.-)
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; rRNA (uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CU31_THIA3
OR_07232018_dam_0_1um_scaffold_425_9
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8073..9980
DNA (1908bp) protein (636aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1U9_THIK1
OR_07232018_dam_0_1um_scaffold_425_10
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10041..10868
DNA (828bp) protein (276aa)
folP; Dihydropteroate synthase (DHPS) (Dihydropteroate pyrophosphorylase) (EC:2.5.1.15)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205, ECO:0000313|EMBL:CAZ88798.1};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Dihydropteroate synthase (DHPS) (Dihydropteroate pyrophosphorylase) n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CU29_THIA3
OR_07232018_dam_0_1um_scaffold_425_11
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10915..12234
DNA (1320bp) protein (440aa)
glmM; Phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Phosphoglucosamine mutase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CU28_THIA3
OR_07232018_dam_0_1um_scaffold_425_12
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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12385..13467
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI0003667265
phosphate ABC transporter periplasmic phosphate-binding protein PstS
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; TaxID=637389 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus ATCC 51756.;"
OR_07232018_dam_0_1um_scaffold_425_13
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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13552..14508
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI00035E4B2B
phosphate ABC transporter inner membrane subunit PstC
Putative phosphate ABC transporter permease protein {ECO:0000313|EMBL:BAJ81507.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
OR_07232018_dam_0_1um_scaffold_425_14
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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14618..15355
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI000380E7BC
phosphate ABC transporter permease
Phosphate ABC transporter, inner membrane subunit PstA {ECO:0000313|EMBL:EGO94166.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
OR_07232018_dam_0_1um_scaffold_425_15
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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15500..16531
DNA (1032bp) protein (344aa)
Phosphate-binding protein PstS n=4 Tax=Ralstonia RepID=B2UGP6_RALPJ
phosphate ABC transporter substrate-binding protein
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; TaxID=1264675 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii OR214.;"
OR_07232018_dam_0_1um_scaffold_425_16
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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16654..17127
DNA (474bp) protein (158aa)
Phosphate ABC transporter, permease protein PstC n=1 Tax=Polaromonas sp. CF318 RepID=J2TQF1_9BURK
phosphate ABC transporter inner membrane protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
Displaying 16 items

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