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OR_07232018_dam_0_1um_scaffold_486

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07232018_dam_0_1um_scaffold_486_1
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..937
DNA (936bp) protein (312aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WYL3_THIK1
Uncharacterized protein {ECO:0000313|EMBL:CDW93865.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
hypothetical protein
OR_07232018_dam_0_1um_scaffold_486_2
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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950..1141
DNA (192bp) protein (64aa)
Uncharacterized protein n=2 Tax=Thiomonas RepID=D6CN68_THIA3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAZ89996.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_486_3
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1122..2342)
DNA (1221bp) protein (407aa)
Putative transporter MFS type ynfM or yzyC n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CN73_THIA3
putative transporter; MFS type ynfM or yzyC
Putative transporter MFS type ynfM or yzyC {ECO:0000313|EMBL:CAZ90001.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_486_4
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2455..3390
DNA (936bp) protein (312aa)
Putative transcriptional regulator (LysR family) n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CN74_THIA3
putative transcriptional regulator (LysR family)
Putative transcriptional regulator (LysR family) {ECO:0000313|EMBL:CAZ90002.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_486_5
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3314..4291)
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CN75_THIA3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDW93861.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
OR_07232018_dam_0_1um_scaffold_486_6
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4397..5707)
DNA (1311bp) protein (437aa)
Putative hydroxypyruvate reductase {ECO:0000313|EMBL:CDW93859.1}; EC=1.1.1.81 {ECO:0000313|EMBL:CDW93859.1};; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
hydroxypyruvate reductase (EC:1.1.1.81)
Hydroxypyruvate reductase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WYL8_THIK1
OR_07232018_dam_0_1um_scaffold_486_7
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5750..6640)
DNA (891bp) protein (297aa)
glxR; 2-hydroxy-3-oxopropionate reductase (Tartronate semialdehyde reductase) (TSAR) (EC:1.1.1.60)
2-hydroxy-3-oxopropionate reductase (Tartronate semialdehyde reductase) (TSAR) {ECO:0000313|EMBL:CAZ90005.1}; EC=1.1.1.60 {ECO:0000313|EMBL:CAZ90005.1};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
2-hydroxy-3-oxopropionate reductase (Tartronate semialdehyde reductase) (TSAR) n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CN77_THIA3
OR_07232018_dam_0_1um_scaffold_486_8
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6676..7449)
DNA (774bp) protein (258aa)
hyi; hydroxypyruvate isomerase (EC:5.3.1.22)
Hydroxypyruvate isomerase {ECO:0000256|PIRNR:PIRNR006241, ECO:0000313|EMBL:CAZ90006.1}; EC=5.3.1.22 {ECO:0000256|PIRNR:PIRNR006241, ECO:0000313|EMBL:CAZ90006.1};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Hydroxypyruvate isomerase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CN78_THIA3
OR_07232018_dam_0_1um_scaffold_486_9
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7453..9207)
DNA (1755bp) protein (585aa)
Glyoxylate carboligase {ECO:0000313|EMBL:CDW93856.1}; EC=4.1.1.47 {ECO:0000313|EMBL:CDW93856.1};; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
gcl; glyoxylate carboligase (Tartronate-semialdehyde synthase) (EC:4.1.1.47)
Glyoxylate carboligase (Tartronate-semialdehyde synthase) n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CN79_THIA3
OR_07232018_dam_0_1um_scaffold_486_10
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9326..9517)
DNA (192bp) protein (64aa)
putative 4-oxalocrotonate tautomerase (EC:5.3.2.-)
Tautomerase {ECO:0000256|RuleBase:RU362032}; EC=5.3.2.- {ECO:0000256|RuleBase:RU362032, ECO:0000313|EMBL:CAZ90009.1};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
4-oxalocrotonate tautomerase family enzyme n=2 Tax=Thiomonas RepID=D5WYM3_THIK1
OR_07232018_dam_0_1um_scaffold_486_11
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9550..10686)
DNA (1137bp) protein (379aa)
aroG3; Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive (Phospho-2-keto-3-deoxyheptonate aldolase) (DAHP synthetase) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase) (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361, ECO:0000313|EMBL:CAZ90010.1};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CN82_THIA3
OR_07232018_dam_0_1um_scaffold_486_12
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11166..12404
DNA (1239bp) protein (413aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WYM5_THIK1
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ADG32202.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_486_13
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12419..13621
DNA (1203bp) protein (401aa)
Putative ABC-type antimicrobial peptide transport system, permease component n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CN84_THIA3
Putative ABC-type antimicrobial peptide transport system, permease component
Putative ABC-type antimicrobial peptide transport system, permease component {ECO:0000313|EMBL:CAZ90012.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_486_14
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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13631..14359
DNA (729bp) protein (243aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
ABC transporter related protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WYM7_THIK1
ABC transporter
OR_07232018_dam_0_1um_scaffold_486_15
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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14397..15539
DNA (1143bp) protein (381aa)
Carbohydrate-selective porin OprB n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WYM8_THIK1
carbohydrate-selective porin OprB
Carbohydrate-selective porin OprB {ECO:0000313|EMBL:ADG32205.1}; Flags: Precursor;; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
Displaying 15 items

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