ggKbase home page

OR_07232018_dam_0_1um_scaffold_1789

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07232018_dam_0_1um_scaffold_1789_1
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(3..104)
DNA (102bp) protein (34aa)
Putative Site-specific recombinase, resolvase family (Phage related) n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9E9_9BACT
putative site-specific recombinase, resolvase family (phage related)
Putative Site-specific recombinase, resolvase family (Phage related) {ECO:0000313|EMBL:CBK39858.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
OR_07232018_dam_0_1um_scaffold_1789_2
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

229..1869
DNA (1641bp) protein (547aa)
alkK; Medium-chain-fatty-acid--CoA ligase (Medium-chain acyl-CoA synthetase) (EC:6.2.1.- 6.2.1.26)
Medium-chain-fatty-acid--CoA ligase (Medium-chain acyl-CoA synthetase) {ECO:0000313|EMBL:CAZ88284.1}; EC=6.2.1.- {ECO:0000313|EMBL:CAZ88284.1};; EC=6.2.1.26 {ECO:0000313|EMBL:CAZ88284.1};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Medium-chain-fatty-acid--CoA ligase (Medium-chain acyl-CoA synthetase) n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CSL5_THIA3
OR_07232018_dam_0_1um_scaffold_1789_3
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1711..2046)
DNA (336bp) protein (112aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X0M4_THIK1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG30670.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_1789_4
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2076..3590)
DNA (1515bp) protein (505aa)
putative Phosphomethylpyrimidine kinase ThiD/thiamine-phosphate diphosphorylase fused protein ThiE (EC:2.7.4.7 2.5.1.3)
Putative Phosphomethylpyrimidine kinase ThiD/thiamine-phosphate diphosphorylase fused protein ThiE {ECO:0000313|EMBL:CAZ88281.1}; EC=2.5.1.3 {ECO:0000313|EMBL:CAZ88281.1};; EC=2.7.4.7 {ECO:0000313|EMBL:CAZ88281.1};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Putative Phosphomethylpyrimidine kinase ThiD/thiamine-phosphate diphosphorylase fused protein ThiE n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CSL2_THIA3
OR_07232018_dam_0_1um_scaffold_1789_5
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3696..3962
DNA (267bp) protein (89aa)
Transposase IS3/IS911 family protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X183_THIK1
transposase IS3/IS911 family protein
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:ADG30879.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_1789_6
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3995..4849
DNA (855bp) protein (285aa)
Integrase catalytic region n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X184_THIK1
integrase catalytic subunit
Integrase catalytic region {ECO:0000313|EMBL:ADG30880.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_1789_7
unknown

Not on your lists

5295..5411
DNA (117bp) protein (39aa)

This feature has no annotations

Displaying 7 items

View Taxonomy