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FFSP_09242018_shore_0_2um_scaffold_1430

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFSP_09242018_shore_0_2um_scaffold_1430_1
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3..347
DNA (345bp) protein (115aa)
ECF subfamily RNA polymerase, sigma-24 subunit n=1 Tax=Ralstonia sp. PBA RepID=I9KXD1_9RALS
ECF subfamily RNA polymerase, sigma-24 subunit {ECO:0000313|EMBL:EIZ04990.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
ECF subfamily RNA polymerase sigma-24 subunit
FFSP_09242018_shore_0_2um_scaffold_1430_2

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363..1166
DNA (804bp) protein (268aa)
Putative transmembrane transcriptional regulator (Anti-sigma factor) n=1 Tax=mine drainage metagenome RepID=E6PRY0_9ZZZZ
Putative transmembrane transcriptional regulator (Anti-sigma factor) {ECO:0000313|EMBL:CBH97686.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
transmembrane anti-sigma factor
FFSP_09242018_shore_0_2um_scaffold_1430_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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1294..2232
DNA (939bp) protein (313aa)
Sulfoxide reductase catalytic subunit YedY id=1347825 bin=GWE1_T_denit_62_9 species=Methylococcus capsulatus genus=Methylococcus taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
sulfite oxidase subunit YedY
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_09242018_shore_0_2um_scaffold_1430_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2232..2852
DNA (621bp) protein (207aa)
Sulfoxide reductase heme-binding subunit YedZ id=1347826 bin=GWE1_T_denit_62_9 species=Thiocapsa marina genus=Thiocapsa taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
yedZ; sulfoxide reductase heme-binding subunit YedZ
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_09242018_shore_0_2um_scaffold_1430_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2934..3656)
DNA (723bp) protein (241aa)
Alginate regulatory protein AlgP n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1I2H1_PSEUO
Histone protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_09242018_shore_0_2um_scaffold_1430_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3958..5202)
DNA (1245bp) protein (415aa)
diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase id=1347828 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_09242018_shore_0_2um_scaffold_1430_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5308..5673
DNA (366bp) protein (122aa)
frataxin n=1 Tax=Thiobacillus thioparus RepID=UPI000371AC67
CyaY protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_09242018_shore_0_2um_scaffold_1430_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5680..6258
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036B88DA
MarR family transcriptional regulator
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_09242018_shore_0_2um_scaffold_1430_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6313..6408)
DNA (96bp) protein (32aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036057E1
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying 9 items

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