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FFSP_09242018_shore_0_2um_scaffold_1600

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFSP_09242018_shore_0_2um_scaffold_1600_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2..199
DNA (198bp) protein (66aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037B597E
TPR repeat-containing protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_09242018_shore_0_2um_scaffold_1600_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

199..759
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036AB3C9
outer membrane lipoprotein LolB
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_09242018_shore_0_2um_scaffold_1600_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

756..1589
DNA (834bp) protein (278aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000255|HAMAP-Rule:MF_00061}; Short=CMK {ECO:0000255|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000255|HAMAP-Rule:MF_00061};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000255|HAMAP-Rule:MF_00061}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
4-diphosphocytidyl-2C-methyl-D-erythritol kinase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003788A70
FFSP_09242018_shore_0_2um_scaffold_1600_trna_1
unknown

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1614..1685
DNA (72bp)
transferRNA Gln
FFSP_09242018_shore_0_2um_scaffold_1600_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1793..2743
DNA (951bp) protein (317aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SLR5_THIDA
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_09242018_shore_0_2um_scaffold_1600_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2815..3432
DNA (618bp) protein (206aa)
50S ribosomal protein L25 n=1 Tax=Thiobacillus thioparus RepID=UPI0003723DA9
50S ribosomal protein L25
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_09242018_shore_0_2um_scaffold_1600_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3473..4069
DNA (597bp) protein (199aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase id=1308456 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_09242018_shore_0_2um_scaffold_1600_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4066..5157
DNA (1092bp) protein (364aa)
Putative uncharacterized protein id=1308457 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
ychF; GTP-dependent nucleic acid-binding protein EngD
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_09242018_shore_0_2um_scaffold_1600_trna_2
unknown

Not on your lists

5241..5322
DNA (82bp)
transferRNA Tyr
FFSP_09242018_shore_0_2um_scaffold_1600_trna_3
unknown

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5363..5433
DNA (71bp)
transferRNA Gly
FFSP_09242018_shore_0_2um_scaffold_1600_trna_4
unknown

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5480..5551
DNA (72bp)
transferRNA Thr
FFSP_09242018_shore_0_2um_scaffold_1600_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5657..5794
DNA (138bp) protein (46aa)
tuf; elongation factor Tu (EC:3.6.5.3)
tuf; elongation factor Tu (EC:3.6.5.3); K02358 elongation factor Tu id=12495325 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Tax=GWE1_Thiobacillus_62_9_curated
Displaying 12 items

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