ggKbase home page

FFSP_09242018_shore_0_2um_scaffold_1077_8

Organism: FFSP_09242018_shore_0_2um_Hydrogenophilales_62_9

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 8 ASCG 14 / 38 MC: 3
Location: comp(6215..6739)

Top 3 Functional Annotations

Value Algorithm Source
Crossover junction endodeoxyribonuclease RuvC id=1336268 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb similarity UNIREF
DB: UNIREF100
  • Identity: 91.8
  • Coverage: 171.0
  • Bit_score: 308
  • Evalue 2.20e-81
ruvC; Holliday junction resolvase similarity KEGG
DB: KEGG
  • Identity: 87.1
  • Coverage: 171.0
  • Bit_score: 297
  • Evalue 2.50e-78
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 94.2
  • Coverage: 171.0
  • Bit_score: 319
  • Evalue 1.80e-84

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 525
GTGAGCGGAATCCGCATCCTCGGCATCGACCCCGGCCTGCGCATCACCGGCTTCGGCCTGATCGAACAGACCGGCCAGAAGCTGGCCTATGTCGCCAGCGGCGTGATCAAGAGCGGCGAGGGTGAATTGCCGCAGCGCCTGGGCGTGCTGTTCGCAGGCTTGAACGAGGTGATCGCCACCTGGCAACCCGATACCTGCGCGGTGGAAATCGTCTTCGTCAACGTCAACCCGCAATCCACGCTGCTGCTCGGGCAGGCGCGCGGCGCCGTCATTTGCTCGGCGGTGTCGAATCGGCTGCCGGTGGCGGAATACACTGCCTTGCAGATCAAGCAGGCAGTGGCCGGTCATGGCAAGGCGGCCAAGGAGCAGGTGCAGGAAATGGTCAAGCGCCTGTTGAACCTGCCGGTGGCGCCTACCGCCGACGCCGCCGACGCGCTGGCCTGCGCCATCACCCATGCCCATGGCAGCCGCCTTGGCGTCCACTCCACTGCGGGTTATCGTGTGAAGAGCGGACGGTTGGTCTGA
PROTEIN sequence
Length: 175
VSGIRILGIDPGLRITGFGLIEQTGQKLAYVASGVIKSGEGELPQRLGVLFAGLNEVIATWQPDTCAVEIVFVNVNPQSTLLLGQARGAVICSAVSNRLPVAEYTALQIKQAVAGHGKAAKEQVQEMVKRLLNLPVAPTADAADALACAITHAHGSRLGVHSTAGYRVKSGRLV*