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FFSP_09242018_shore_0_2um_scaffold_1077

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFSP_09242018_shore_0_2um_scaffold_1077_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..687)
DNA (687bp) protein (229aa)
protein tolQ n=1 Tax=Thiobacillus denitrificans RepID=UPI0003707686
MotA/TolQ/ExbB proton channel family protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_09242018_shore_0_2um_scaffold_1077_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(684..1100)
DNA (417bp) protein (139aa)
4-hydroxybenzoyl-CoA thioesterase id=1336263 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
4-hydroxybenzoyl-CoA thioesterase
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_09242018_shore_0_2um_scaffold_1077_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1266..2291)
DNA (1026bp) protein (342aa)
ruvB; Holliday junction DNA helicase RuvB (EC:3.1.22.4)
Holliday junction DNA helicase RuvB n=1 Tax=Thiobacillus denitrificans RepID=UPI000360A38E
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_09242018_shore_0_2um_scaffold_1077_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2331..3836)
DNA (1506bp) protein (502aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003676186
diguanylate cyclase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_09242018_shore_0_2um_scaffold_1077_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3839..4132)
DNA (294bp) protein (98aa)
Holliday junction DNA helicase RuvA n=1 Tax=Thiobacillus denitrificans RepID=UPI000378BE3C
DNA recombination protein, RuvA
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_09242018_shore_0_2um_scaffold_1077_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4142..5623)
DNA (1482bp) protein (494aa)
diguanylate cyclase id=12496610 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
diguanylate cyclase
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_09242018_shore_0_2um_scaffold_1077_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5626..6201)
DNA (576bp) protein (192aa)
Holliday junction DNA helicase RuvA n=1 Tax=Thiobacillus denitrificans RepID=UPI000378BE3C
DNA recombination protein, RuvA
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_09242018_shore_0_2um_scaffold_1077_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6215..6739)
DNA (525bp) protein (175aa)
Crossover junction endodeoxyribonuclease RuvC id=1336268 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
ruvC; Holliday junction resolvase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_09242018_shore_0_2um_scaffold_1077_9
Acaryochloris marina, Acaryochloris, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(6736..7155)
DNA (420bp) protein (140aa)
twitching motility protein PilT n=1 Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI000248505A
PilT domain-containing protein
PIN domain protein {ECO:0000313|EMBL:ABW31643.1}; TaxID=329726 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Acaryochloris.;" source="Acaryochloris marina (strain MBIC 11017).;"
FFSP_09242018_shore_0_2um_scaffold_1077_10
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7148..7372)
DNA (225bp) protein (75aa)
Prevent-host-death family protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C1F7_NITHN
prevent-host-death family protein
Prevent-host-death family protein {ECO:0000313|EMBL:ADE16509.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
FFSP_09242018_shore_0_2um_scaffold_1077_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7421..8152)
DNA (732bp) protein (244aa)
transcriptional regulator n=1 Tax=Thiobacillus denitrificans RepID=UPI00037B6279
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_09242018_shore_0_2um_scaffold_1077_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8174..8638
DNA (465bp) protein (155aa)
N-acetylglucosamine kinase (EC:2.7.1.59)
fructokinase n=1 Tax=Thiobacillus thioparus RepID=UPI00036CFD3D
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Displaying 12 items

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