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FFSP_09242018_shore_0_2um_Hydrogenophilales_62_9

FFSP_09242018_shore_0_2um_RIFOXYD1_FULL_Hydrogenophilales_62_11_curated_62_9
In projects: FFSP_09242018_shore_0_2um  |  SOB_across_mines

Consensus taxonomy: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated  →  Hydrogenophilales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 451-500 of 776 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
FFSP_09242018_shore_0_2um_scaffold_2728
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 3603 bp 61.42 9.24 95.59
FFSP_09242018_shore_0_2um_scaffold_2007
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
7 5470 bp 57.86 11.65 95.59
FFSP_09242018_shore_0_2um_scaffold_2655
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
5 3681 bp 63.60 8.52 95.60
FFSP_09242018_shore_0_2um_scaffold_3881
Order: Hydrogenophilales (66.67%)
3 2686 bp 64.30 9.94 95.61
FFSP_09242018_shore_0_2um_scaffold_4370
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 2438 bp 62.59 7.69 95.61
FFSP_09242018_shore_0_2um_scaffold_5789
Order: Hydrogenophilales (100%)
3 1904 bp 61.92 13.00 95.64
FFSP_09242018_shore_0_2um_scaffold_1820
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
5 5109 bp 63.46 10.25 95.65
FFSP_09242018_shore_0_2um_scaffold_2564
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 3798 bp 63.03 11.22 95.66
FFSP_09242018_shore_0_2um_scaffold_1415
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (55.56%)
9 6476 bp 59.37 8.73 95.75
FFSP_09242018_shore_0_2um_scaffold_1388
Species: Thiobacillus denitrificans (50%)
6 6604 bp 64.67 10.13 95.76
FFSP_09242018_shore_0_2um_scaffold_2462
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
5 3945 bp 61.24 10.38 95.82
FFSP_09242018_shore_0_2um_scaffold_3239
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 3109 bp 63.49 7.72 95.82
FFSP_09242018_shore_0_2um_scaffold_4726
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (75%)
4 2279 bp 61.52 9.68 95.83
FFSP_09242018_shore_0_2um_scaffold_1634
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (55.56%)
9 5663 bp 63.34 9.72 95.83
FFSP_09242018_shore_0_2um_scaffold_5435
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 2009 bp 63.36 7.39 95.87
FFSP_09242018_shore_0_2um_scaffold_4121
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 2552 bp 64.66 9.05 95.92
FFSP_09242018_shore_0_2um_scaffold_1593
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (75%)
8 5813 bp 66.51 8.88 95.94
FFSP_09242018_shore_0_2um_scaffold_7159
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1604 bp 63.53 9.54 95.95
FFSP_09242018_shore_0_2um_scaffold_2634
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (60%)
5 3708 bp 57.79 10.07 95.95
FFSP_09242018_shore_0_2um_scaffold_4679
Species: Thiobacillus denitrificans (50%)
2 2301 bp 61.54 7.17 95.96
FFSP_09242018_shore_0_2um_scaffold_1954
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
6 4798 bp 62.84 8.38 95.98
FFSP_09242018_shore_0_2um_scaffold_8463
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 1409 bp 59.47 9.69 96.03
FFSP_09242018_shore_0_2um_scaffold_1202
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (63.64%)
11 7670 bp 60.43 8.00 96.06
FFSP_09242018_shore_0_2um_scaffold_4806
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 2248 bp 60.01 8.01 96.09
FFSP_09242018_shore_0_2um_scaffold_1566
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 5929 bp 61.29 9.18 96.09
FFSP_09242018_shore_0_2um_scaffold_1126
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (57.14%)
7 8213 bp 59.13 11.49 96.10
FFSP_09242018_shore_0_2um_scaffold_3293
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 3065 bp 66.30 7.83 96.12
FFSP_09242018_shore_0_2um_scaffold_2036
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
5 4643 bp 67.18 8.40 96.14
FFSP_09242018_shore_0_2um_scaffold_5566
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 1975 bp 61.57 11.32 96.15
FFSP_09242018_shore_0_2um_scaffold_9124
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 1329 bp 56.21 8.35 96.16
FFSP_09242018_shore_0_2um_scaffold_2483
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
6 3902 bp 61.81 8.96 96.18
FFSP_09242018_shore_0_2um_scaffold_3642
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 2835 bp 65.78 8.47 96.19
FFSP_09242018_shore_0_2um_scaffold_4332
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 2454 bp 63.37 7.52 96.21
FFSP_09242018_shore_0_2um_scaffold_2739
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (83.33%)
6 3589 bp 63.25 8.57 96.21
FFSP_09242018_shore_0_2um_scaffold_9983
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1241 bp 67.12 7.37 96.21
FFSP_09242018_shore_0_2um_scaffold_2743
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
4 3585 bp 60.95 10.00 96.23
FFSP_09242018_shore_0_2um_scaffold_1179
Order: Hydrogenophilales (50%)
8 7785 bp 60.85 8.11 96.26
FFSP_09242018_shore_0_2um_scaffold_465
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (85%)
20 18534 bp 59.40 10.94 96.28
FFSP_09242018_shore_0_2um_scaffold_1808
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (87.5%)
8 5150 bp 60.50 12.12 96.29
FFSP_09242018_shore_0_2um_scaffold_4892
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 2211 bp 59.38 7.19 96.34
FFSP_09242018_shore_0_2um_scaffold_3042
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
5 3272 bp 63.81 7.47 96.36
FFSP_09242018_shore_0_2um_scaffold_2024
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (80%)
5 4678 bp 64.09 8.34 96.39
FFSP_09242018_shore_0_2um_scaffold_2327
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (60%)
5 4142 bp 63.18 8.15 96.40
FFSP_09242018_shore_0_2um_scaffold_1151
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (58.33%)
12 9205 bp 59.60 11.02 96.40
FFSP_09242018_shore_0_2um_scaffold_3716
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 2788 bp 63.34 10.65 96.41
FFSP_09242018_shore_0_2um_scaffold_2867
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (80%)
5 3447 bp 63.48 8.53 96.43
FFSP_09242018_shore_0_2um_scaffold_2256
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (80%)
5 4273 bp 61.78 9.02 96.47
FFSP_09242018_shore_0_2um_scaffold_1985
Species: GWE1_Thiobacillus_62_9_curated (71.43%)
7 4741 bp 64.33 7.28 96.50
FFSP_09242018_shore_0_2um_scaffold_1769
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 5249 bp 63.21 8.20 96.53
FFSP_09242018_shore_0_2um_scaffold_1511
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
10 6128 bp 58.42 11.14 96.59
Displaying items 451-500 of 776 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.