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FFSP_09242018_shore_0_2um_Hydrogenophilales_62_9

FFSP_09242018_shore_0_2um_RIFOXYD1_FULL_Hydrogenophilales_62_11_curated_62_9
In projects: FFSP_09242018_shore_0_2um  |  SOB_across_mines

Consensus taxonomy: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated  →  Hydrogenophilales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 401-450 of 776 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
FFSP_09242018_shore_0_2um_scaffold_1624
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (85.71%)
7 5704 bp 52.28 11.12 94.69
FFSP_09242018_shore_0_2um_scaffold_771
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (83.33%)
12 11997 bp 62.15 9.24 94.70
FFSP_09242018_shore_0_2um_scaffold_8212
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1438 bp 61.13 7.20 94.71
FFSP_09242018_shore_0_2um_scaffold_3417
Order: Hydrogenophilales (75%)
4 2971 bp 63.14 8.03 94.72
FFSP_09242018_shore_0_2um_scaffold_7233
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1590 bp 63.90 8.49 94.72
FFSP_09242018_shore_0_2um_scaffold_1777
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
5 5229 bp 62.99 7.89 94.72
FFSP_09242018_shore_0_2um_scaffold_875
Order: Hydrogenophilales (100%)
13 10542 bp 63.75 9.85 94.74
FFSP_09242018_shore_0_2um_scaffold_9737
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1263 bp 63.82 7.72 94.77
FFSP_09242018_shore_0_2um_scaffold_8065
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 1459 bp 63.33 7.40 94.79
FFSP_09242018_shore_0_2um_scaffold_1526
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
5 6067 bp 58.58 9.59 94.79
FFSP_09242018_shore_0_2um_scaffold_5265
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 2066 bp 64.38 9.87 94.82
FFSP_09242018_shore_0_2um_scaffold_8912
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1354 bp 63.29 9.64 94.83
FFSP_09242018_shore_0_2um_scaffold_5733
Species: GWE1_Thiobacillus_62_9_curated (50%)
2 1920 bp 62.24 8.20 94.84
FFSP_09242018_shore_0_2um_scaffold_8987
Order: Hydrogenophilales (50%)
4 1344 bp 56.85 6.92 94.87
FFSP_09242018_shore_0_2um_scaffold_2724
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (83.33%)
6 3605 bp 59.94 7.99 94.87
FFSP_09242018_shore_0_2um_scaffold_5771
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1910 bp 64.50 8.48 94.87
FFSP_09242018_shore_0_2um_scaffold_1392
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
6 6595 bp 63.41 10.44 94.89
FFSP_09242018_shore_0_2um_scaffold_12927
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1030 bp 50.87 6.99 94.95
FFSP_09242018_shore_0_2um_scaffold_3763
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 2755 bp 63.99 6.59 94.95
FFSP_09242018_shore_0_2um_scaffold_2482
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (60%)
5 3904 bp 64.60 12.06 94.98
FFSP_09242018_shore_0_2um_scaffold_6574
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 1718 bp 62.28 6.81 94.99
FFSP_09242018_shore_0_2um_scaffold_9036
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 1339 bp 66.84 7.51 95.00
FFSP_09242018_shore_0_2um_scaffold_2254
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (75%)
4 4275 bp 60.89 10.42 95.02
FFSP_09242018_shore_0_2um_scaffold_2284
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 4230 bp 62.62 9.79 95.04
FFSP_09242018_shore_0_2um_scaffold_4600
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 2339 bp 64.22 9.30 95.04
FFSP_09242018_shore_0_2um_scaffold_11080
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1152 bp 65.28 6.64 95.05
FFSP_09242018_shore_0_2um_scaffold_1765
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (80%)
5 5260 bp 66.01 10.12 95.08
FFSP_09242018_shore_0_2um_scaffold_8003
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 1467 bp 64.55 11.76 95.09
FFSP_09242018_shore_0_2um_scaffold_967
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (64.29%)
14 9623 bp 58.94 8.92 95.12
FFSP_09242018_shore_0_2um_scaffold_10552
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (100%)
1 1192 bp 63.34 8.31 95.13
FFSP_09242018_shore_0_2um_scaffold_1656
Order: Hydrogenophilales (60%)
5 5613 bp 62.34 9.75 95.14
FFSP_09242018_shore_0_2um_scaffold_991
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
8 9305 bp 62.49 10.78 95.17
FFSP_09242018_shore_0_2um_scaffold_2944
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (75%)
4 3369 bp 64.83 9.22 95.19
FFSP_09242018_shore_0_2um_scaffold_5962
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1856 bp 60.02 10.26 95.20
FFSP_09242018_shore_0_2um_scaffold_2376
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (85.71%)
7 4076 bp 66.17 6.70 95.24
FFSP_09242018_shore_0_2um_scaffold_6735
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 1682 bp 54.10 7.22 95.24
FFSP_09242018_shore_0_2um_scaffold_6010
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1845 bp 59.40 7.80 95.28
FFSP_09242018_shore_0_2um_scaffold_874
Species: GWE1_Thiobacillus_62_9_curated (61.54%)
13 10547 bp 65.90 9.73 95.29
FFSP_09242018_shore_0_2um_scaffold_2465
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (80%)
5 3938 bp 60.21 8.27 95.30
FFSP_09242018_shore_0_2um_scaffold_4725
Species: GWE1_Thiobacillus_62_9_curated (100%)
3 2279 bp 66.34 8.42 95.30
FFSP_09242018_shore_0_2um_scaffold_7322
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1577 bp 62.71 8.66 95.31
FFSP_09242018_shore_0_2um_scaffold_8128
Species: GWE1_Thiobacillus_62_9_curated (50%)
2 1450 bp 64.41 10.03 95.38
FFSP_09242018_shore_0_2um_scaffold_5856
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 1884 bp 57.01 9.55 95.38
FFSP_09242018_shore_0_2um_scaffold_4443
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 2399 bp 58.07 9.32 95.41
FFSP_09242018_shore_0_2um_scaffold_3344
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 3024 bp 64.85 10.02 95.44
FFSP_09242018_shore_0_2um_scaffold_2707
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (75%)
4 3624 bp 62.91 9.11 95.45
FFSP_09242018_shore_0_2um_scaffold_1459
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
7 6311 bp 63.97 10.70 95.45
FFSP_09242018_shore_0_2um_scaffold_5912
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1870 bp 62.51 7.30 95.45
FFSP_09242018_shore_0_2um_scaffold_4308
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
5 2467 bp 62.75 7.36 95.46
FFSP_09242018_shore_0_2um_scaffold_12349
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1065 bp 58.03 7.75 95.49
Displaying items 401-450 of 776 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.