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FFSP_09242018_shore_0_2um_Hydrogenophilales_62_9

FFSP_09242018_shore_0_2um_RIFOXYD1_FULL_Hydrogenophilales_62_11_curated_62_9
In projects: FFSP_09242018_shore_0_2um  |  SOB_across_mines

Consensus taxonomy: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated  →  Hydrogenophilales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 351-400 of 776 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
FFSP_09242018_shore_0_2um_scaffold_2428
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (60%)
5 3986 bp 66.28 7.30 93.40
FFSP_09242018_shore_0_2um_scaffold_2772
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
5 3548 bp 58.91 11.37 93.43
FFSP_09242018_shore_0_2um_scaffold_7855
Species: GWE1_Thiobacillus_62_9_curated (100%)
3 1486 bp 63.32 9.69 93.47
FFSP_09242018_shore_0_2um_scaffold_558
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (78.95%)
19 15695 bp 61.17 10.31 93.49
FFSP_09242018_shore_0_2um_scaffold_1104
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
8 8437 bp 62.33 9.10 93.52
FFSP_09242018_shore_0_2um_scaffold_1648
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (55.56%)
9 5620 bp 63.43 8.78 93.52
FFSP_09242018_shore_0_2um_scaffold_4742
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 2274 bp 61.04 9.63 93.54
FFSP_09242018_shore_0_2um_scaffold_2903
Order: Hydrogenophilales (66.67%)
3 3409 bp 60.75 8.49 93.55
FFSP_09242018_shore_0_2um_scaffold_7648
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1520 bp 60.53 9.38 93.55
FFSP_09242018_shore_0_2um_scaffold_2519
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (80%)
5 3854 bp 61.18 6.50 93.57
FFSP_09242018_shore_0_2um_scaffold_2111
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
6 4514 bp 62.45 9.37 93.58
FFSP_09242018_shore_0_2um_scaffold_6494
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 1734 bp 66.49 7.44 93.60
FFSP_09242018_shore_0_2um_scaffold_2645
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
5 3692 bp 49.84 7.19 93.61
FFSP_09242018_shore_0_2um_scaffold_1124
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (77.78%)
9 8252 bp 62.71 10.22 93.61
FFSP_09242018_shore_0_2um_scaffold_3846
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (75%)
4 4983 bp 62.29 8.28 93.62
FFSP_09242018_shore_0_2um_scaffold_1580
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (75%)
8 5861 bp 62.57 9.60 93.62
FFSP_09242018_shore_0_2um_scaffold_1369
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (80%)
10 6694 bp 61.17 9.08 93.62
FFSP_09242018_shore_0_2um_scaffold_4891
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 2211 bp 59.38 8.68 93.62
FFSP_09242018_shore_0_2um_scaffold_5517
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1986 bp 62.24 7.78 93.66
FFSP_09242018_shore_0_2um_scaffold_1037
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (83.33%)
12 8908 bp 61.67 11.18 93.66
FFSP_09242018_shore_0_2um_scaffold_5624
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1953 bp 60.78 9.60 93.70
FFSP_09242018_shore_0_2um_scaffold_1839
Species: Thiobacillus denitrificans (50%)
6 5077 bp 64.57 8.24 93.72
FFSP_09242018_shore_0_2um_scaffold_6079
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (75%)
4 1826 bp 64.02 8.95 93.81
FFSP_09242018_shore_0_2um_scaffold_2020
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
5 4691 bp 62.20 10.97 93.82
FFSP_09242018_shore_0_2um_scaffold_11538
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1119 bp 59.25 8.45 93.83
FFSP_09242018_shore_0_2um_scaffold_4907
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (75%)
4 2205 bp 63.13 9.18 93.88
FFSP_09242018_shore_0_2um_scaffold_8661
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1383 bp 61.89 9.33 93.93
FFSP_09242018_shore_0_2um_scaffold_2929
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
5 3388 bp 61.39 8.72 93.95
FFSP_09242018_shore_0_2um_scaffold_9272
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (100%)
1 1312 bp 60.29 6.52 93.98
FFSP_09242018_shore_0_2um_scaffold_2473
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (50%)
2 3922 bp 67.26 8.99 94.01
FFSP_09242018_shore_0_2um_scaffold_6159
Species: Thiobacillus denitrificans (66.67%)
3 1806 bp 60.63 6.73 94.02
FFSP_09242018_shore_0_2um_scaffold_3343
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (60%)
5 3024 bp 59.42 8.09 94.05
FFSP_09242018_shore_0_2um_scaffold_3518
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 2909 bp 64.28 8.10 94.05
FFSP_09242018_shore_0_2um_scaffold_12207
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1074 bp 64.43 6.98 94.13
FFSP_09242018_shore_0_2um_scaffold_2279
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 4235 bp 61.84 8.82 94.14
FFSP_09242018_shore_0_2um_scaffold_2162
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 4426 bp 64.23 9.49 94.15
FFSP_09242018_shore_0_2um_scaffold_2710
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (75%)
4 3622 bp 61.71 9.36 94.17
FFSP_09242018_shore_0_2um_scaffold_4323
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 2459 bp 63.48 8.42 94.18
FFSP_09242018_shore_0_2um_scaffold_1419
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
7 6450 bp 59.47 7.65 94.19
FFSP_09242018_shore_0_2um_scaffold_11973
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (50%)
2 1089 bp 66.57 6.61 94.21
FFSP_09242018_shore_0_2um_scaffold_3366
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 3009 bp 57.59 9.82 94.32
FFSP_09242018_shore_0_2um_scaffold_1662
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (77.78%)
9 7196 bp 54.10 8.19 94.39
FFSP_09242018_shore_0_2um_scaffold_7544
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (66.67%)
3 1538 bp 62.55 8.00 94.41
FFSP_09242018_shore_0_2um_scaffold_2229
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
4 4308 bp 63.46 7.56 94.43
FFSP_09242018_shore_0_2um_scaffold_4547
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 2359 bp 64.31 10.81 94.49
FFSP_09242018_shore_0_2um_scaffold_8997
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1343 bp 62.03 10.50 94.49
FFSP_09242018_shore_0_2um_scaffold_4976
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 2178 bp 60.97 9.71 94.49
FFSP_09242018_shore_0_2um_scaffold_3415
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
4 2971 bp 58.43 8.73 94.61
FFSP_09242018_shore_0_2um_scaffold_7307
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1579 bp 66.43 7.31 94.62
FFSP_09242018_shore_0_2um_scaffold_1142
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (91.67%)
12 8048 bp 58.82 9.88 94.64
Displaying items 351-400 of 776 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.