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FFSP_09242018_shore_0_2um_Hydrogenophilales_62_9

FFSP_09242018_shore_0_2um_RIFOXYD1_FULL_Hydrogenophilales_62_11_curated_62_9
In projects: FFSP_09242018_shore_0_2um  |  SOB_across_mines

Consensus taxonomy: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated  →  Hydrogenophilales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 501-550 of 776 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
FFSP_09242018_shore_0_2um_scaffold_2513
Species: Thiobacillus denitrificans (100%)
3 3865 bp 63.98 7.22 100.13
FFSP_09242018_shore_0_2um_scaffold_5930
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 1865 bp 58.02 9.57 99.73
FFSP_09242018_shore_0_2um_scaffold_6278
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1776 bp 66.61 6.59 93.07
FFSP_09242018_shore_0_2um_scaffold_4213
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 2510 bp 63.11 6.99 93.35
FFSP_09242018_shore_0_2um_scaffold_4725
Species: GWE1_Thiobacillus_62_9_curated (100%)
3 2279 bp 66.34 8.42 95.30
FFSP_09242018_shore_0_2um_scaffold_5934
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1865 bp 61.34 6.60 76.41
FFSP_09242018_shore_0_2um_scaffold_6026
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 1841 bp 62.03 9.21 99.08
FFSP_09242018_shore_0_2um_scaffold_6282
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1775 bp 58.87 10.90 98.37
FFSP_09242018_shore_0_2um_scaffold_3239
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 3109 bp 63.49 7.72 95.82
FFSP_09242018_shore_0_2um_scaffold_4984
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 2175 bp 67.22 10.48 100.41
FFSP_09242018_shore_0_2um_scaffold_9124
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 1329 bp 56.21 8.35 96.16
FFSP_09242018_shore_0_2um_scaffold_4221
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 2506 bp 63.57 9.82 86.55
FFSP_09242018_shore_0_2um_scaffold_3760
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 2758 bp 54.53 13.16 90.72
FFSP_09242018_shore_0_2um_scaffold_5435
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 2009 bp 63.36 7.39 95.87
FFSP_09242018_shore_0_2um_scaffold_7855
Species: GWE1_Thiobacillus_62_9_curated (100%)
3 1486 bp 63.32 9.69 93.47
FFSP_09242018_shore_0_2um_scaffold_6809
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 1667 bp 54.77 8.73 75.40
FFSP_09242018_shore_0_2um_scaffold_4742
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 2274 bp 61.04 9.63 93.54
FFSP_09242018_shore_0_2um_scaffold_3000
Species: GWE1_Thiobacillus_62_9_curated (100%)
3 3318 bp 64.98 7.87 98.55
FFSP_09242018_shore_0_2um_scaffold_5442
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 2006 bp 64.11 9.05 98.85
FFSP_09242018_shore_0_2um_scaffold_3770
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 2752 bp 63.92 7.25 93.10
FFSP_09242018_shore_0_2um_scaffold_3004
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 3315 bp 53.06 11.81 92.94
FFSP_09242018_shore_0_2um_scaffold_3260
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 3094 bp 64.35 8.24 82.03
FFSP_09242018_shore_0_2um_scaffold_2284
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 4230 bp 62.62 9.79 95.04
FFSP_09242018_shore_0_2um_scaffold_3517
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 2909 bp 59.02 7.63 89.00
FFSP_09242018_shore_0_2um_scaffold_3773
Species: Thiobacillus denitrificans (66.67%)
3 2749 bp 59.66 8.95 90.80
FFSP_09242018_shore_0_2um_scaffold_5702
Order: Hydrogenophilales (100%)
3 1929 bp 60.45 9.10 75.58
FFSP_09242018_shore_0_2um_scaffold_5452
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 2003 bp 64.80 7.79 98.40
FFSP_09242018_shore_0_2um_scaffold_4503
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 2375 bp 61.89 8.15 90.57
FFSP_09242018_shore_0_2um_scaffold_8180
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1443 bp 60.01 8.00 87.94
FFSP_09242018_shore_0_2um_scaffold_2809
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 3501 bp 61.18 7.93 76.35
FFSP_09242018_shore_0_2um_scaffold_7878
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1483 bp 55.90 7.89 91.23
FFSP_09242018_shore_0_2um_scaffold_7624
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1524 bp 58.40 7.97 90.94
FFSP_09242018_shore_0_2um_scaffold_9419
Species: Thiobacillus denitrificans (50%)
2 1295 bp 60.08 7.18 82.47
FFSP_09242018_shore_0_2um_scaffold_2561
Species: GWE1_Thiobacillus_62_9_curated (50%)
2 3802 bp 62.02 10.30 81.04
FFSP_09242018_shore_0_2um_scaffold_10746
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1177 bp 58.88 7.01 89.72
FFSP_09242018_shore_0_2um_scaffold_11607
Species: GWE1_Thiobacillus_62_9_curated (50%)
2 1114 bp 61.31 7.81 99.37
FFSP_09242018_shore_0_2um_scaffold_1845
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 5066 bp 60.48 7.79 98.07
FFSP_09242018_shore_0_2um_scaffold_7890
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (50%)
2 1482 bp 66.13 8.91 80.36
FFSP_09242018_shore_0_2um_scaffold_6331
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1767 bp 63.33 8.40 100.17
FFSP_09242018_shore_0_2um_scaffold_7381
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1566 bp 55.87 9.10 93.10
FFSP_09242018_shore_0_2um_scaffold_5474
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1996 bp 58.27 12.17 86.87
FFSP_09242018_shore_0_2um_scaffold_3290
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 3067 bp 61.92 6.94 69.16
FFSP_09242018_shore_0_2um_scaffold_6078
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1826 bp 59.53 6.90 99.23
FFSP_09242018_shore_0_2um_scaffold_4011
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 2616 bp 61.12 8.94 92.20
FFSP_09242018_shore_0_2um_scaffold_5733
Species: GWE1_Thiobacillus_62_9_curated (50%)
2 1920 bp 62.24 8.20 94.84
FFSP_09242018_shore_0_2um_scaffold_8714
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1377 bp 64.85 9.04 99.35
FFSP_09242018_shore_0_2um_scaffold_9435
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1293 bp 67.05 7.54 89.33
FFSP_09242018_shore_0_2um_scaffold_7644
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1520 bp 64.74 7.30 98.49
FFSP_09242018_shore_0_2um_scaffold_3298
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 3062 bp 61.79 9.99 97.09
FFSP_09242018_shore_0_2um_scaffold_12927
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1030 bp 50.87 6.99 94.95
Displaying items 501-550 of 776 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.