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FFSP_09242018_shore_0_2um_Hydrogenophilales_62_9

FFSP_09242018_shore_0_2um_RIFOXYD1_FULL_Hydrogenophilales_62_11_curated_62_9
In projects: FFSP_09242018_shore_0_2um  |  SOB_across_mines

Consensus taxonomy: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated  →  Hydrogenophilales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 551-600 of 776 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
FFSP_09242018_shore_0_2um_scaffold_3814
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 2726 bp 66.18 8.14 93.32
FFSP_09242018_shore_0_2um_scaffold_11116
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1149 bp 62.40 8.62 84.60
FFSP_09242018_shore_0_2um_scaffold_8212
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1438 bp 61.13 7.20 94.71
FFSP_09242018_shore_0_2um_scaffold_11632
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1112 bp 64.03 6.88 89.57
FFSP_09242018_shore_0_2um_scaffold_9707
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1266 bp 64.53 8.53 99.76
FFSP_09242018_shore_0_2um_scaffold_9710
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1266 bp 64.53 11.14 99.29
FFSP_09242018_shore_0_2um_scaffold_6876
Species: GWE1_Thiobacillus_62_9_curated (50%)
2 1655 bp 54.08 7.70 63.44
FFSP_09242018_shore_0_2um_scaffold_11644
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1111 bp 63.19 9.32 92.08
FFSP_09242018_shore_0_2um_scaffold_8997
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1343 bp 62.03 10.50 94.49
FFSP_09242018_shore_0_2um_scaffold_9462
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1290 bp 69.53 8.02 100.00
FFSP_09242018_shore_0_2um_scaffold_10532
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1193 bp 62.28 7.54 93.29
FFSP_09242018_shore_0_2um_scaffold_9983
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1241 bp 67.12 7.37 96.21
FFSP_09242018_shore_0_2um_scaffold_6120
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1816 bp 66.52 8.92 100.11
FFSP_09242018_shore_0_2um_scaffold_5517
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1986 bp 62.24 7.78 93.66
FFSP_09242018_shore_0_2um_scaffold_6636
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1704 bp 58.33 7.39 97.54
FFSP_09242018_shore_0_2um_scaffold_4827
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 2242 bp 62.18 9.77 99.96
FFSP_09242018_shore_0_2um_scaffold_7687
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (50%)
2 1515 bp 69.57 7.03 98.22
FFSP_09242018_shore_0_2um_scaffold_9737
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1263 bp 63.82 7.72 94.77
FFSP_09242018_shore_0_2um_scaffold_5526
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1985 bp 64.33 8.99 90.53
FFSP_09242018_shore_0_2um_scaffold_4831
Species: GWE1_Thiobacillus_62_9_curated (100%)
2 2241 bp 56.94 12.38 99.20
FFSP_09242018_shore_0_2um_scaffold_12207
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1074 bp 64.43 6.98 94.13
FFSP_09242018_shore_0_2um_scaffold_12463
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1058 bp 59.55 8.36 100.10
FFSP_09242018_shore_0_2um_scaffold_4324
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 2458 bp 61.88 6.65 79.70
FFSP_09242018_shore_0_2um_scaffold_7952
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (50%)
2 1474 bp 63.64 8.45 100.75
FFSP_09242018_shore_0_2um_scaffold_12210
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1074 bp 63.59 8.38 100.28
FFSP_09242018_shore_0_2um_scaffold_3095
Species: Thiobacillus denitrificans (50%)
2 3228 bp 67.16 8.55 98.98
FFSP_09242018_shore_0_2um_scaffold_5024
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 2160 bp 59.86 8.19 88.19
FFSP_09242018_shore_0_2um_scaffold_5280
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 2060 bp 62.72 9.47 98.59
FFSP_09242018_shore_0_2um_scaffold_11676
Species: CG_Hydro_01 (50%)
2 1109 bp 53.65 14.61 71.96
FFSP_09242018_shore_0_2um_scaffold_5281
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 2060 bp 63.79 6.55 98.45
FFSP_09242018_shore_0_2um_scaffold_6656
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1700 bp 62.18 8.29 100.06
FFSP_09242018_shore_0_2um_scaffold_6659
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1700 bp 67.00 8.21 98.65
FFSP_09242018_shore_0_2um_scaffold_7455
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1553 bp 65.49 7.73 97.36
FFSP_09242018_shore_0_2um_scaffold_3620
Species: GWE1_Thiobacillus_62_9_curated (50%)
2 2848 bp 53.41 9.32 89.96
FFSP_09242018_shore_0_2um_scaffold_2644
Species: GWE1_Thiobacillus_62_9_curated (50%)
2 3694 bp 62.26 8.45 99.89
FFSP_09242018_shore_0_2um_scaffold_5038
Species: Thiobacillus denitrificans (100%)
2 2153 bp 66.74 8.08 100.19
FFSP_09242018_shore_0_2um_scaffold_4600
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 2339 bp 64.22 9.30 95.04
FFSP_09242018_shore_0_2um_scaffold_9764
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1261 bp 62.65 7.14 98.97
FFSP_09242018_shore_0_2um_scaffold_8789
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1368 bp 65.13 8.33 82.02
FFSP_09242018_shore_0_2um_scaffold_1931
Species: GWE1_Thiobacillus_62_9_curated (50%)
2 4846 bp 55.18 7.49 98.68
FFSP_09242018_shore_0_2um_scaffold_9256
Species: GWE1_Thiobacillus_62_9_curated (100%)
2 1314 bp 65.30 9.13 99.54
FFSP_09242018_shore_0_2um_scaffold_10325
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1209 bp 58.56 7.44 78.16
FFSP_09242018_shore_0_2um_scaffold_6673
Species: GWE1_Thiobacillus_62_9_curated (50%)
2 1697 bp 65.29 11.31 91.57
FFSP_09242018_shore_0_2um_scaffold_11958
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1090 bp 64.86 7.84 100.18
FFSP_09242018_shore_0_2um_scaffold_7983
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1470 bp 65.37 11.43 92.45
FFSP_09242018_shore_0_2um_scaffold_7730
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1507 bp 64.96 9.46 97.54
FFSP_09242018_shore_0_2um_scaffold_7733
Species: GWE1_Thiobacillus_62_9_curated (50%)
2 1506 bp 61.29 7.57 90.44
FFSP_09242018_shore_0_2um_scaffold_4107
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 2558 bp 63.64 9.09 97.81
FFSP_09242018_shore_0_2um_scaffold_3388
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 2997 bp 63.83 6.81 100.10
FFSP_09242018_shore_0_2um_scaffold_2926
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 3391 bp 64.73 8.80 92.72
Displaying items 551-600 of 776 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.