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OR_08142018_10m_0_1um_scaffold_239

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_10m_0_1um_scaffold_239_1
GWA2_Gallionellales_60_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..443)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000367427F
tetratricopeptide repeat protein
Tax=GWA2_Gallionellales_60_18_curated
OR_08142018_10m_0_1um_scaffold_239_2
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

542..898
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003776E77
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
OR_08142018_10m_0_1um_scaffold_239_3
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1161..2138)
DNA (978bp) protein (326aa)
Putative transposase n=2 Tax=Proteobacteria RepID=A9I2N3_BORPD
transposase
Putative transposase {ECO:0000313|EMBL:CAP44079.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
OR_08142018_10m_0_1um_scaffold_239_4
R_Gallionellales_60_31, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2475..2705)
DNA (231bp) protein (77aa)
Tax=RIFCSPLOWO2_02_Gallionellales_60_31_curated
OR_08142018_10m_0_1um_scaffold_239_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2827..4005)
DNA (1179bp) protein (393aa)
S-adenosylmethionine synthase id=12498683 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
S-adenosylmethionine synthase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_10m_0_1um_scaffold_239_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4168..5292)
DNA (1125bp) protein (375aa)
methylase n=1 Tax=Thiobacillus thioparus RepID=UPI0003609FE6
putative methyltransferase, Methylase of polypeptide chain release factors
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_10m_0_1um_scaffold_239_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5405..6145)
DNA (741bp) protein (247aa)
pteridine reductase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036B391D
pteridine reductase
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_239_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6219..7364
DNA (1146bp) protein (382aa)
Putative uncharacterized protein id=1335132 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_10m_0_1um_scaffold_239_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7367..8224)
DNA (858bp) protein (286aa)
cation transporter n=1 Tax=Thiobacillus thioparus RepID=UPI00036ADB4B
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_10m_0_1um_scaffold_239_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8237..8698)
DNA (462bp) protein (154aa)
heat-shock protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003827700
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_10m_0_1um_scaffold_239_11
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8685..9665)
DNA (981bp) protein (327aa)
PhoH-like protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SFF2_THIDA
PhoH-like protein
PhoH-like protein {ECO:0000313|EMBL:AAZ98658.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_08142018_10m_0_1um_scaffold_239_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9662..11002)
DNA (1341bp) protein (447aa)
tRNA-i(6)A37 thiotransferase enzyme MiaB; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA id=12498675 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
tRNA-i(6)A37 thiotransferase enzyme MiaB
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_239_13
unknown

Not on your lists

11017..11337
DNA (321bp) protein (107aa)

This feature has no annotations

OR_08142018_10m_0_1um_scaffold_239_14
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11480..12610)
DNA (1131bp) protein (377aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003738CF3
SoxH - like protein
Tax=RBG_16_Betaproteobacteria_58_11_curated
OR_08142018_10m_0_1um_scaffold_239_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12750..13388)
DNA (639bp) protein (213aa)
Metallo-beta-lactamase superfamily protein id=1335197 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
metallo-beta-lactamase superfamily protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_239_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13414..14052
DNA (639bp) protein (213aa)
Putative uncharacterized protein id=1335198 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_239_17
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14157..14573
DNA (417bp) protein (139aa)
GreA/GreB family elongation factor n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SMM4_THIDA
GreA/GreB family elongation factor
GreA/GreB family elongation factor {ECO:0000313|EMBL:AAZ96019.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_08142018_10m_0_1um_scaffold_239_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14587..15477
DNA (891bp) protein (297aa)
Membrane protein, putative id=1335201 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_239_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15467..15826)
DNA (360bp) protein (120aa)
hypothetical protein id=12495504 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_239_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15884..17134)
DNA (1251bp) protein (417aa)
Lytic murein transglycosylase id=1335205 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
lytic murein transglycosylase
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_239_21
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17298..19064)
DNA (1767bp) protein (589aa)
Asparagine synthetase id=1335206 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
asparagine synthase
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_239_22
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19259..20548)
DNA (1290bp) protein (430aa)
Retron-type reverse transcriptase n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YCL0_THIV6
Group II intron-encoded protein LtrA {ECO:0000313|EMBL:EXI90215.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
Retron-type reverse transcriptase
OR_08142018_10m_0_1um_scaffold_239_23
unknown

Not on your lists

comp(21214..21306)
DNA (93bp) protein (31aa)
hypothetical protein id=12494239 bin=THIO_HI species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=THIO_HI organism_group=Betaproteobacteria
OR_08142018_10m_0_1um_scaffold_239_24
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21306..21542)
DNA (237bp) protein (79aa)
hypothetical protein id=12494240 bin=THIO_HI species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=GWA2_Rhodocyclales_65_20_curated
OR_08142018_10m_0_1um_scaffold_239_25
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21615..22625)
DNA (1011bp) protein (337aa)
Nucleoside-diphosphate-sugar epimerase id=1304150 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
nucleoside-diphosphate-sugar epimerase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_10m_0_1um_scaffold_239_26
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22681..23991
DNA (1311bp) protein (437aa)
3-deoxy-D-manno-octulosonic acid transferase n=1 Tax=Thiobacillus denitrificans RepID=UPI000382BFEA
3-deoxy-D-manno-octulosonic-acid transferase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_10m_0_1um_scaffold_239_27
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23933..25246)
DNA (1314bp) protein (438aa)
Type I secretion outer membrane protein, TolC id=1304148 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
type I secretion outer membrane protein TolC
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_239_28
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25272..25589)
DNA (318bp) protein (106aa)
Rhodanese-like protein id=1304147 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
rhodanese-like protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_239_29
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25627..26280)
DNA (654bp) protein (218aa)
Putative uncharacterized protein id=1304146 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
protein-L-isoaspartate o-methyltransferase
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_239_30
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26373..28304
DNA (1932bp) protein (644aa)
thiamine biosynthesis protein ThiC; K03147 thiamine biosynthesis protein ThiC id=12494251 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
thiamine biosynthesis protein ThiC
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying items 1-30 of 33 in total

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