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OR_08142018_10m_0_1um_scaffold_344

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_10m_0_1um_scaffold_344_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..4016)
DNA (4014bp) protein (1338aa)
NdvB n=1 Tax=Thioalkalivibrio sp. AKL11 RepID=UPI00037FC2C6
cyclic beta 1-2 glucan synthetase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_10m_0_1um_scaffold_344_2
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4484..5257)
DNA (774bp) protein (258aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B1J2_9PROT
Crp/Fnr family transcriptional regulator
Tax=RBG_16_Gamma2_65_34_curated
OR_08142018_10m_0_1um_scaffold_344_3
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5282..6103)
DNA (822bp) protein (274aa)
Putative PAS/PAC sensor protein n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GLI1_NITSI
histidine kinase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
OR_08142018_10m_0_1um_scaffold_344_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6151..7107)
DNA (957bp) protein (319aa)
Response regulator receiver modulated diguanylate cyclase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21SK1_RHOFD
diguanylate cyclase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_10m_0_1um_scaffold_344_5
Methyloglobulus morosus, Methyloglobulus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7107..8846)
DNA (1740bp) protein (580aa)
Sensor histidine kinase AruS {ECO:0000313|EMBL:ESS71559.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ESS71559.1};; TaxID=1116472 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methyloglobulus.;" source="Methyloglobulus morosus KoM1.;"
Sensor histidine kinase AruS n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5BUN8_9GAMM
ATP-binding region, ATPase-like protein
OR_08142018_10m_0_1um_scaffold_344_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9656..10045
DNA (390bp) protein (130aa)
Cyclic nucleotide-binding domain protein id=1312395 bin=GWE1_T_denit_62_9 species=Methyloversatilis universalis genus=Methyloversatilis taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
cyclic nucleotide-binding domain-containing protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_344_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10110..10784)
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037E1D85
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_10m_0_1um_scaffold_344_8
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11191..12090
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003739FEA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96198.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_08142018_10m_0_1um_scaffold_344_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12071..13123
DNA (1053bp) protein (351aa)
homoserine O-succinyltransferase (EC:2.3.1.46)
Homoserine O-succinyltransferase id=1355372 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_344_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13120..14214
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003672415
ABC transporter permease
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_344_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14214..14981
DNA (768bp) protein (256aa)
ABC transporter, ATP-binding protein id=1355370 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
ABC transporter ATP-binding protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_344_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14971..15918
DNA (948bp) protein (316aa)
ABC-type transport system periplasmic component id=1355369 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
ABC-type transport system periplasmic component
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_344_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15915..16517
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003607F93
lipoprotein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_10m_0_1um_scaffold_344_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16685..17113
DNA (429bp) protein (143aa)
Putative uncharacterized protein id=1355367 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_344_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17142..17483)
DNA (342bp) protein (114aa)
Putative uncharacterized protein id=1355366 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_344_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17468..17701)
DNA (234bp) protein (78aa)
Putative uncharacterized protein id=1355366 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_344_17
RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17698..18018)
DNA (321bp) protein (107aa)
hypothetical protein id=12494109 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated
OR_08142018_10m_0_1um_scaffold_344_18
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(18028..18243)
DNA (216bp) protein (72aa)
hypothetical protein id=12494110 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK41362.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
OR_08142018_10m_0_1um_scaffold_344_19
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18261..19616)
DNA (1356bp) protein (452aa)
MFS transporter n=1 Tax=Thiobacillus thioparus RepID=UPI0003777C93
transport transmembrane protein
Putative transport transmembrane protein {ECO:0000313|EMBL:AAZ96206.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_08142018_10m_0_1um_scaffold_344_20
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19654..20046)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036CF7DD
death on curing protein
Tax=RBG_16_Gallionellales_57_15_curated
OR_08142018_10m_0_1um_scaffold_344_21
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20047..20271)
DNA (225bp) protein (75aa)
transcriptional regulator n=1 Tax=Thiobacillus denitrificans RepID=UPI0003697DB2
putative addiction module antidote
Tax=RBG_16_Gallionellales_57_15_curated
OR_08142018_10m_0_1um_scaffold_344_22
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20315..20548
DNA (234bp) protein (78aa)
RelE/StbE family addiction module toxin id=12497287 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Tax=RBG_16_Gallionellales_57_15_curated
OR_08142018_10m_0_1um_scaffold_344_23
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20607..22061)
DNA (1455bp) protein (485aa)
syp:SYNPCC7002_A2132 DNA methyltransferase id=45480 bin=ACD39 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD39 organism_group=Unknown_CP organism_desc=unknown
hypothetical protein
Tax=RBG_16_Betaproteobacteria_58_11_curated
OR_08142018_10m_0_1um_scaffold_344_24
R_Gallionellales_60_31, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22067..22957)
DNA (891bp) protein (297aa)
DNA-damage-inducible protein D n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q60CS7_METCA
dinD; DNA-damage-inducible protein D
Tax=RIFCSPLOWO2_02_Gallionellales_60_31_curated
OR_08142018_10m_0_1um_scaffold_344_25
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22986..23555)
DNA (570bp) protein (190aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
exodeoxyribonuclease III n=1 Tax=Thiobacillus denitrificans RepID=UPI000379EC27
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_344_26
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23597..24235
DNA (639bp) protein (213aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase id=1355128 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RBG_16_Gallionellales_57_15_curated
OR_08142018_10m_0_1um_scaffold_344_27
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24174..24818
DNA (645bp) protein (215aa)
Putative uncharacterized protein id=1355127 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RBG_16_Gallionellales_57_15_curated
OR_08142018_10m_0_1um_scaffold_344_28
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24978..26405)
DNA (1428bp) protein (476aa)
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B id=1355126 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_344_29
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26402..27154)
DNA (753bp) protein (251aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YLE0_9DELT
conserved hypothetical cytosolic protein
Tax=RBG_16_Gallionellales_57_15_curated
OR_08142018_10m_0_1um_scaffold_344_30
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28000..29451)
DNA (1452bp) protein (484aa)
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A id=1355125 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
Displaying items 1-30 of 53 in total

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