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OR_08142018_10m_0_1um_scaffold_429

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_10m_0_1um_scaffold_429_1
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(136..396)
DNA (261bp) protein (87aa)
Phage transcriptional regulator, AlpA n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6Z7_NITMU
phage transcriptional regulator AlpA
Phage transcriptional regulator, AlpA {ECO:0000313|EMBL:ABB75474.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
OR_08142018_10m_0_1um_scaffold_429_2
unknown

Not on your lists

comp(505..1527)
DNA (1023bp) protein (341aa)

This feature has no annotations

OR_08142018_10m_0_1um_scaffold_429_3
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1617..2171)
DNA (555bp) protein (185aa)
DNA repair protein radc n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WPE3_9BURK
DNA repair protein RadC
Tax=CG_Hydro_01
OR_08142018_10m_0_1um_scaffold_429_4
Nitrosomonas eutropha, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2511..3779)
DNA (1269bp) protein (423aa)
Phage integrase family protein n=1 Tax=Nitrosomonas eutropha (strain C91) RepID=Q0AD73_NITEC
phage integrase family protein
Phage integrase family protein {ECO:0000313|EMBL:ABI60709.1}; TaxID=335283 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas eutropha (strain C91).;"
OR_08142018_10m_0_1um_scaffold_429_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4278..4664)
DNA (387bp) protein (129aa)
Putative membrane protein id=1345801 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_429_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4668..5996)
DNA (1329bp) protein (443aa)
2-phosphoglycolate phosphatase (EC:3.1.3.18)
phosphoglycolate phosphatase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037504EB
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_10m_0_1um_scaffold_429_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6005..6805)
DNA (801bp) protein (267aa)
N-ethylammeline chlorohydrolase n=1 Tax=Thiobacillus thioparus RepID=UPI00035FB450
N-ethylammeline chlorohydrolase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_10m_0_1um_scaffold_429_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6789..7196)
DNA (408bp) protein (136aa)
N-ethylammeline chlorohydrolase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003789560
N-ethylammeline chlorohydrolase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_10m_0_1um_scaffold_429_9
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7318..7878
DNA (561bp) protein (187aa)
gyrA suspected. See adjacent gene [OR_08142018_10m_0_1um_scaffold_429_10].
gyrA; DNA gyrase subunit A
DNA gyrase subunit A n=1 Tax=Thiobacillus denitrificans RepID=UPI00037D33D9
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
OR_08142018_10m_0_1um_scaffold_429_10
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7938..9812
DNA (1875bp) protein (625aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Thiobacillus denitrificans RepID=UPI00037D33D9
OR_08142018_10m_0_1um_scaffold_429_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9816..10907
DNA (1092bp) protein (364aa)
phosphoserine aminotransferase (EC:2.6.1.52)
MFS transporter n=1 Tax=Thiobacillus denitrificans RepID=UPI00037B9C1D
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_10m_0_1um_scaffold_429_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10900..12078
DNA (1179bp) protein (393aa)
D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)
3-phosphoglycerate dehydrogenase n=1 Tax=Thiobacillus thioparus RepID=UPI00036CE5FD
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_10m_0_1um_scaffold_429_13
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12083..13150
DNA (1068bp) protein (356aa)
chorismate mutase (EC:4.2.1.51 5.4.99.5)
prephenate dehydratase n=1 Tax=Thiobacillus thioparus RepID=UPI00036136EF
Chorismate mutase {ECO:0000313|EMBL:AAZ96904.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_08142018_10m_0_1um_scaffold_429_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13147..14313
DNA (1167bp) protein (389aa)
histidinol-phosphate aminotransferase (EC:2.6.1.-)
histidinol-phosphate aminotransferase n=1 Tax=Thiobacillus thioparus RepID=UPI000365F667
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_10m_0_1um_scaffold_429_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14310..15176
DNA (867bp) protein (289aa)
prephenate dehydrogenase (EC:1.3.1.12)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000369C072
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_10m_0_1um_scaffold_429_16
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15176..16462
DNA (1287bp) protein (429aa)
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000255|HAMAP-Rule:MF_00210}; EC=2.5.1.19 {ECO:0000255|HAMAP-Rule:MF_00210};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00210}; Short=EPSP synthase {ECO:0000255|HAMAP-Rule:MF_00210};; Short=EPSPS {ECO:0000255|HAMAP-Rule:MF_00210};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=AROA_THIDA
OR_08142018_10m_0_1um_scaffold_429_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16459..17178
DNA (720bp) protein (240aa)
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase id=1332577 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_429_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


17299..18987
DNA (1689bp) protein (563aa)
30S ribosomal protein S1 n=1 Tax=Thiobacillus denitrificans RepID=UPI000380376F
rpsA; 30S ribosomal protein S1
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_429_19
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18991..19275
DNA (285bp) protein (95aa)
transcriptional regulator n=1 Tax=Thiobacillus denitrificans RepID=UPI00037B3B2F
integration host factor subunit beta
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_10m_0_1um_scaffold_429_20
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19389..19679
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036B7A1F
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_10m_0_1um_scaffold_429_21
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19686..20852
DNA (1167bp) protein (389aa)
N-acetylglucosaminyl transferase n=1 Tax=Thiobacillus denitrificans RepID=UPI000369DF0B
tetratricopeptide repeat-containing protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_429_22
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20882..21577
DNA (696bp) protein (232aa)
orotidine-5'-phosphate decarboxylase (EC:4.1.1.23)
orotidine 5''''-phosphate decarboxylase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003696F87
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_429_23
unknown

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21635..21709
DNA (75bp) protein (25aa)

This feature has no annotations

Displaying 23 items

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