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OR_08142018_10m_0_1um_scaffold_434

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_10m_0_1um_scaffold_434_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..260
DNA (258bp) protein (86aa)
Flagellar hook-basal body complex protein FliE id=1317091 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
fliE; flagellar hook-basal body protein FliE
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_434_2
unknown

Not on your lists

comp(347..505)
DNA (159bp) protein (53aa)

This feature has no annotations

OR_08142018_10m_0_1um_scaffold_434_3
unknown

Not on your lists

comp(505..663)
DNA (159bp) protein (53aa)

This feature has no annotations

OR_08142018_10m_0_1um_scaffold_434_4
GWA2_Gallionellales_60_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(666..1082)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ2 RepID=UPI00036E2CB6
hypothetical protein
Tax=GWA2_Gallionellales_60_18_curated
OR_08142018_10m_0_1um_scaffold_434_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1197..2153)
DNA (957bp) protein (319aa)
CheW protein id=1317090 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
chemotaxis protein CheW
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_434_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2346..3107)
DNA (762bp) protein (254aa)
hypothetical protein id=12495009 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_10m_0_1um_scaffold_434_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3111..3404)
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000378A60A
flagellar protein FhlB
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_10m_0_1um_scaffold_434_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3388..4461)
DNA (1074bp) protein (358aa)
Putative uncharacterized protein id=1317088 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_10m_0_1um_scaffold_434_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4473..4802)
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035C9D5B
flagellar protein FliT
Flagellar protein FliT {ECO:0000313|EMBL:AAZ97547.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_08142018_10m_0_1um_scaffold_434_10
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4816..5250)
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000378579C
flagellar protein FliS
Flagellar protein FliS {ECO:0000313|EMBL:AAZ97546.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_08142018_10m_0_1um_scaffold_434_11
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5265..7244)
DNA (1980bp) protein (660aa)
Flagellar hook-associated protein 2 n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SII3_THIDA
flagellar hook-associated protein 2
Flagellar hook-associated protein 2 {ECO:0000313|EMBL:AAZ97545.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_08142018_10m_0_1um_scaffold_434_12
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7255..7614)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035FEBAA
flagellar protein FlaG protein
Flagellar protein FlaG protein {ECO:0000313|EMBL:ACT49997.1}; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus glucosetrophus (strain SIP3-4).;"
OR_08142018_10m_0_1um_scaffold_434_13
CG_Gallio_02, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7722..9188)
DNA (1467bp) protein (489aa)
Flagellin n=1 Tax=Acidovorax sp. KKS102 RepID=K0IEN0_9BURK
flagellin
Tax=CG_Gallio_02
OR_08142018_10m_0_1um_scaffold_434_14
unknown

Not on your lists

comp(9325..10146)
DNA (822bp) protein (274aa)

This feature has no annotations

OR_08142018_10m_0_1um_scaffold_434_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10160..11746)
DNA (1587bp) protein (529aa)
diguanylate cyclase id=12498707 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
diguanylate cyclase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_10m_0_1um_scaffold_434_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12168..12563)
DNA (396bp) protein (132aa)
Two Component Transcriptional Regulator, LuxR family id=1377515 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
LuxR family transcriptional regulator
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_434_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12630..14090)
DNA (1461bp) protein (487aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003729008
sensor protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_10m_0_1um_scaffold_434_18
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14241..15044
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000377B80A
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_10m_0_1um_scaffold_434_19
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15041..15634
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035DD947
hypothetical protein
MEMO1 family protein Tbd_1586 {ECO:0000256|HAMAP-Rule:MF_00055}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_08142018_10m_0_1um_scaffold_434_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15631..16725
DNA (1095bp) protein (365aa)
pyruvate formate lyase-activating protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037A35D7
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_434_21
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16722..17378
DNA (657bp) protein (219aa)
DeoR family transcriptional regulator n=1 Tax=Thiobacillus thioparus RepID=UPI00037158F6
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_434_22
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17336..18202
DNA (867bp) protein (289aa)
ABC transporter n=1 Tax=Thiobacillus denitrificans RepID=UPI00036639E8
ABC transporter ATPase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_10m_0_1um_scaffold_434_23
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18205..19935
DNA (1731bp) protein (577aa)
Putative uncharacterized protein id=1377508 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_434_24
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19959..20414
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036D968C
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_10m_0_1um_scaffold_434_25
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20430..21623
DNA (1194bp) protein (398aa)
secretion protein HlyD n=1 Tax=Thiobacillus thioparus RepID=UPI00038280DF
secretion protein HlyD
Secretion protein HlyD {ECO:0000313|EMBL:AAZ97534.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_08142018_10m_0_1um_scaffold_434_26
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21737..22639)
DNA (903bp) protein (301aa)
4Fe-4S ferredoxin protein id=12493596 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
4Fe-4S ferredoxin
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_10m_0_1um_scaffold_434_27
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22655..23110
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000374137C
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_10m_0_1um_scaffold_434_28
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23095..24303
DNA (1209bp) protein (403aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:AAZ97472.1}; EC=3.5.1.28 {ECO:0000313|EMBL:AAZ97472.1};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Thiobacillus denitrificans RepID=UPI000376A79F
OR_08142018_10m_0_1um_scaffold_434_29
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24384..26174
DNA (1791bp) protein (597aa)
DNA mismatch repair protein MutL n=1 Tax=Thiobacillus thioparus RepID=UPI00037FA6D8
DNA mismatch repair protein MutL
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_10m_0_1um_scaffold_434_30
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26237..26599
DNA (363bp) protein (121aa)
Putative uncharacterized protein id=1350207 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
Displaying items 1-30 of 55 in total

View Taxonomy