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OR_08142018_10m_0_1um_scaffold_454

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_10m_0_1um_scaffold_454_1
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..209)
DNA (207bp) protein (69aa)
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
OR_08142018_10m_0_1um_scaffold_454_2
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(210..3284)
DNA (3075bp) protein (1025aa)
Adenine specific DNA methylase Mod n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3Y817_THIV6
Adenine specific DNA methylase Mod {ECO:0000313|EMBL:AFL73135.1}; TaxID=765911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocystis.;" source="Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) (Chromatium; violascens).;"
adenine specific DNA methylase Mod
OR_08142018_10m_0_1um_scaffold_454_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3385..4656
DNA (1272bp) protein (424aa)
sugar kinase n=1 Tax=Thiobacillus thioparus RepID=UPI0003616A39
FGGY family sugar kinase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_10m_0_1um_scaffold_454_4
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4763..4909
DNA (147bp) protein (49aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SEW8_THIDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97178.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_08142018_10m_0_1um_scaffold_454_5
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4974..5315)
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Thioalkalivibrio RepID=UPI0003631CE3
rhodanese domain-containing protein
Rhodanese domain protein {ECO:0000313|EMBL:ACL71357.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
OR_08142018_10m_0_1um_scaffold_454_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5349..6827)
DNA (1479bp) protein (493aa)
Ppx/GppA phosphatase (EC:3.6.1.11)
Xopolyphosphatase id=1320596 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_454_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6824..8062)
DNA (1239bp) protein (413aa)
membrane protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000361BC2F
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_10m_0_1um_scaffold_454_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8084..9001)
DNA (918bp) protein (306aa)
CobD/CbiB family protein (EC:6.3.1.10)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000382D339
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_10m_0_1um_scaffold_454_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9001..9471)
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037A7778
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_10m_0_1um_scaffold_454_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9735..11339
DNA (1605bp) protein (535aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036EC9CB
response regulator receiver modulated diguanylate cyclase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_10m_0_1um_scaffold_454_11
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11346..12095)
DNA (750bp) protein (250aa)
permease n=1 Tax=Thiobacillus denitrificans RepID=UPI000376458D
hypothetical protein
Uncharacterized conserved membrane protein {ECO:0000313|EMBL:AAZ96991.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_08142018_10m_0_1um_scaffold_454_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12098..12412)
DNA (315bp) protein (105aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SK06_THIDA
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_10m_0_1um_scaffold_454_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12409..12783)
DNA (375bp) protein (125aa)
camphor resistance protein CrcB n=1 Tax=Thiobacillus denitrificans RepID=UPI00036E0F35
camphor resistance protein CrcB
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_10m_0_1um_scaffold_454_14
Thioalkalivibrio nitratireducens, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12873..14411)
DNA (1539bp) protein (513aa)
Uncharacterized protein n=1 Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0DXN2_THIND
protein of unknown function DUF255
Uncharacterized protein {ECO:0000313|EMBL:AGA33725.1}; TaxID=1255043 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 /; ALEN2).;"
OR_08142018_10m_0_1um_scaffold_454_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14477..14935)
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035D2A1D
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_10m_0_1um_scaffold_454_16
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14990..15352
DNA (363bp) protein (121aa)
molybdenum-pterin-binding protein, molybdate transport system regulatory protein id=12493194 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
molybdenum-pterin-binding protein, molybdate transport system regulatory protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_10m_0_1um_scaffold_454_17
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15594..16052
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-604-O16 RepID=UPI00035CBECA
ISL3 family transposase
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
OR_08142018_10m_0_1um_scaffold_454_18
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16313..16492
DNA (180bp) protein (60aa)
sulfite reductase subunit gamma n=1 Tax=Thiobacillus denitrificans RepID=UPI00036487F8
sulfite reductase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_10m_0_1um_scaffold_454_19
unknown

Not on your lists

16598..16831
DNA (234bp) protein (78aa)

This feature has no annotations

OR_08142018_10m_0_1um_scaffold_454_20
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16833..17117
DNA (285bp) protein (95aa)
nirN; nitrite reductase (EC:1.7.2.1)
Nitrite reductase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AEM8_9PROT
Tax=CG_Hydro_01
OR_08142018_10m_0_1um_scaffold_454_21
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17114..17734
DNA (621bp) protein (207aa)
nitrite reductase (EC:1.7.2.1)
Nitrite reductase (NO-forming) n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BZ90_9GAMM
Tax=RBG_16_Gamma2_64_11_curated
OR_08142018_10m_0_1um_scaffold_454_22
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17855..18109
DNA (255bp) protein (85aa)
Cytochrome d1, heme region n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47AZ1_DECAR
nitrite reductase protein N
Tax=CG_Hydro_01
OR_08142018_10m_0_1um_scaffold_454_23
R_Gallionellales_60_31, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18214..20481
DNA (2268bp) protein (756aa)
TonB-dependent receptor n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CQY2_SIDLE
TonB-dependent receptor
Tax=RIFCSPLOWO2_02_Gallionellales_60_31_curated
OR_08142018_10m_0_1um_scaffold_454_24
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20485..21672
DNA (1188bp) protein (396aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035E3698
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97362.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_08142018_10m_0_1um_scaffold_454_25
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21810..22991
DNA (1182bp) protein (394aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000363A7A3
peptidase U32
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_10m_0_1um_scaffold_454_26
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23386..24372
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035F8AE2
parE; DNA topoisomerase IV subunit B
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_10m_0_1um_scaffold_454_27
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24372..24971
DNA (600bp) protein (200aa)
parE; DNA topoisomerase IV subunit B (EC:5.99.1.-)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035F8AE2
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_10m_0_1um_scaffold_454_28
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24968..27349
DNA (2382bp) protein (794aa)
DNA gyrase subunit A n=1 Tax=Thiobacillus denitrificans RepID=UPI000364F01E
parC; DNA topoisomerase IV subunit A
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_10m_0_1um_scaffold_454_29
unknown

Not on your lists

comp(27457..27543)
DNA (87bp) protein (29aa)

This feature has no annotations

Displaying 29 items

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