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OR_08142018_10m_0_1um_scaffold_925

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_10m_0_1um_scaffold_925_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44..973
DNA (930bp) protein (310aa)
Probable chemotaxis transmembrane protein MotA id=1332263 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
flagellar motor protein MotA
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_925_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1065..1553
DNA (489bp) protein (163aa)
flagellar motor protein MotB n=1 Tax=Thiobacillus denitrificans RepID=UPI0003739296
motB; flagellar motor protein MotB
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_10m_0_1um_scaffold_925_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1704..2858
DNA (1155bp) protein (385aa)
flagellar biosynthesis protein FlhB n=1 Tax=Thiobacillus denitrificans RepID=UPI00036ADE0A
flagellar biosynthetic protein FlhB
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_10m_0_1um_scaffold_925_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2855..4939
DNA (2085bp) protein (695aa)
flagellar biosynthesis protein FlhA n=1 Tax=Thiobacillus denitrificans RepID=UPI00037DF65E
flagellar biosynthesis protein FlhA
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_10m_0_1um_scaffold_925_5
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4936..6204
DNA (1269bp) protein (423aa)
flagellar biosynthesis regulator FlhF n=1 Tax=Thiobacillus thioparus RepID=UPI00037C9F8B
flhF; flagellar biosynthesis regulator FlhF
Putative flagellar biosynthetic protein FlhF {ECO:0000313|EMBL:AAZ97200.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_08142018_10m_0_1um_scaffold_925_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6197..7078
DNA (882bp) protein (294aa)
Putative flagellar biosynthesis protein FlhG id=1357064 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
flagellar biosynthesis protein FlhG
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_925_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7088..7303
DNA (216bp) protein (72aa)
RNA polymerase sigma factor id=1357065 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
RNA polymerase sigma-70 factor
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_925_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7294..7671
DNA (378bp) protein (126aa)
RNA polymerase sigma factor id=1357065 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
RNA polymerase sigma-70 factor
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_925_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7653..8390
DNA (738bp) protein (246aa)
Chemotaxis transmembrane protein MotA id=1357066 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
motC; flagellar motor protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_925_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8395..9171
DNA (777bp) protein (259aa)
Outer membrane chemotaxis MotB protein id=1357067 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
flagellar motor protein MotD
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_925_11
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9156..10475)
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CG48_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:CEG07843.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
OR_08142018_10m_0_1um_scaffold_925_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10681..11505
DNA (825bp) protein (275aa)
PIM1 peptidase (EC:3.4.21.53)
Lon protease n=1 Tax=Thiobacillus thioparus RepID=UPI000366D8FE
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_10m_0_1um_scaffold_925_13
unknown

Not on your lists

comp(11622..11756)
DNA (135bp) protein (45aa)

This feature has no annotations

OR_08142018_10m_0_1um_scaffold_925_14
unknown

Not on your lists

12275..12388
DNA (114bp) protein (38aa)

This feature has no annotations

OR_08142018_10m_0_1um_scaffold_925_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12506..12745
DNA (240bp) protein (80aa)
hypothetical protein id=12493962 bin=THIO_HI species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
OR_08142018_10m_0_1um_scaffold_925_16
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12742..13167
DNA (426bp) protein (142aa)
hypothetical protein id=12497365 bin=THIO_MID species=Nitrosomonas europaea genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
twitching motility protein PilT
Tax=RBG_16_Betaproteobacteria_58_11_curated
OR_08142018_10m_0_1um_scaffold_925_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13297..13542
DNA (246bp) protein (82aa)
hypothetical protein id=12493564 bin=THIO_HI species=Thioalkalivibrio sp. ALJ17 genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
type I restriction modification system, restriction subunit
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_10m_0_1um_scaffold_925_18
Candidatus Symbiobacter mobilis, Candidatus Symbiobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13545..16613
DNA (3069bp) protein (1023aa)
Type I restriction-modification system restriction subunit n=1 Tax=Candidatus Symbiobacter mobilis CR RepID=U5N5M6_9BURK
Type I restriction-modification system restriction subunit {ECO:0000313|EMBL:AGX86816.1}; TaxID=946483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Candidatus Symbiobacter mobilis CR.;"
type I restriction-modification system restriction subunit
OR_08142018_10m_0_1um_scaffold_925_19
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

16603..17859
DNA (1257bp) protein (419aa)
Restriction modification system DNA specificity domain n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZMN0_OPITP
restriction modification system DNA specificity subunit
Restriction modification system DNA specificity domain {ECO:0000313|EMBL:ACB74375.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
OR_08142018_10m_0_1um_scaffold_925_20
RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18119..18442
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BSZ4_9GAMM
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated
OR_08142018_10m_0_1um_scaffold_925_21
Alishewanella aestuarii, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18439..19440
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Alishewanella aestuarii B11 RepID=J1Q6E0_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:EJI86758.1}; TaxID=1197174 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alishewanella.;" source="Alishewanella aestuarii B11.;"
hypothetical protein
OR_08142018_10m_0_1um_scaffold_925_22
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19437..21077
DNA (1641bp) protein (547aa)
Type I restriction-modification system, M subunit n=3 Tax=Acidithiobacillus RepID=B5ELN6_ACIF5
type I restriction-modification system, M subunit
Type I restriction-modification system, M subunit {ECO:0000313|EMBL:ACH84220.1}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
OR_08142018_10m_0_1um_scaffold_925_23
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21388..21681
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Methyloversatilis universalis RepID=UPI00035FA467
Peptide methionine sulfoxide reductase {ECO:0000313|EMBL:EYC50926.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str. Niagara R.;"
hypothetical protein
Displaying 23 items

View Taxonomy