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OR_08142018_10m_0_1um_scaffold_57

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_10m_0_1um_scaffold_57_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

1..84
DNA (84bp) protein (28aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_57_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

94..1641
DNA (1548bp) protein (516aa)
Beta-lactamase n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EBG9_RUNSL
beta-lactamase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_57_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(1643..2902)
DNA (1260bp) protein (420aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y0S2_9SPHI
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_57_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(2904..4703)
DNA (1800bp) protein (600aa)
Uncharacterized protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GU49_9SPHI
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_57_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(4723..6768)
DNA (2046bp) protein (682aa)
Oligopeptide transporter, OPT family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PD75_CHIPD
oligopeptide transporter
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_57_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(6786..8294)
DNA (1509bp) protein (503aa)
Amino acid/peptide transporter n=1 Tax=Niabella soli DSM 19437 RepID=H1NPZ8_9SPHI
peptide ABC transporter
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_57_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

8365..9651
DNA (1287bp) protein (429aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035F2413
phosphoribosylamine--glycine ligase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_57_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

9715..10740
DNA (1026bp) protein (342aa)
Cell shape determining protein, MreB/Mrl family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMS3_NIAKG
MreB/Mrl family cell shape determining protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_57_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

10834..11604
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000377BA49
rod shape-determining protein MreC
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_57_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

11601..12131
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000363C4FD
rod shape-determining protein MreD
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_57_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

12193..14301
DNA (2109bp) protein (703aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036078A2
peptidoglycan glycosyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_57_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

14298..15644
DNA (1347bp) protein (449aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003789EDD
cell cycle protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_57_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

15654..16412
DNA (759bp) protein (253aa)
Beta-lactamase domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMS8_NIAKG
beta-lactamase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_57_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(16409..16927)
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003776DB3
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_57_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(16956..17525)
DNA (570bp) protein (190aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_57_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(17485..18135)
DNA (651bp) protein (217aa)
RNA polymerase sigma70 factor n=1 Tax=Segetibacter koreensis RepID=UPI00037BE707
ECF subfamily RNA polymerase sigma-24 subunit
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_57_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

18221..20695
DNA (2475bp) protein (825aa)
Phosphoenolpyruvate carboxylase n=1 Tax=Riemerella anatipestifer (strain ATCC 11845 / DSM 15868 / JCM 9532 / NCTC 11014) RepID=E4T920_RIEAD
phosphoenolpyruvate carboxylase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_57_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(20696..21289)
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035D96E6
HhH-GPD family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_57_19
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

21334..21765
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB92_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_57_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

21816..22724
DNA (909bp) protein (303aa)
Band 7 protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB91_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_57_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(22744..22974)
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000373EDE3
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_57_22
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(23022..23957)
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035F53D4
peptidase M23
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_57_23
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


24091..26715
DNA (2625bp) protein (875aa)
alanyl-tRNA synthetase n=1 Tax=Niabella aurantiaca RepID=UPI00037DF87B
alanyl-tRNA synthetase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_57_24
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

26715..28160
DNA (1446bp) protein (482aa)
gatB; glutamyl-tRNA amidotransferase subunit B (EC:6.3.5.-)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003784491
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_57_25
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

28170..29309
DNA (1140bp) protein (380aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003789498
thiol-disulfide isomerase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_57_26
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(29466..30893)
DNA (1428bp) protein (476aa)
membrane protein n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B4DA84
ragb/susd domain protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_57_27
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(30940..34020)
DNA (3081bp) protein (1027aa)
membrane protein n=1 Tax=Pedobacter agri RepID=UPI00029AD74A
tonb-dependent receptor plug
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_57_28
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(34329..35789)
DNA (1461bp) protein (487aa)
Putative outer membrane protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GWI4_9SPHI
RagB/SusD domain protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_57_29
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(35814..38948)
DNA (3135bp) protein (1045aa)
TonB-dependent receptor plug n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K999_9BACT
TonB-dependent receptor plug
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_57_30
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(39054..41384)
DNA (2331bp) protein (777aa)
Exporter of the RND superfamily protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMI3_NIAKG
RND superfamily exporter
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying items 1-30 of 51 in total

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