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OR_08142018_10m_0_1um_scaffold_902

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_10m_0_1um_scaffold_902_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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1..894
DNA (894bp) protein (298aa)
signal recognition particle n=1 Tax=Segetibacter koreensis RepID=UPI000364F953
signal recognition particle subunit FFH/SRP54 (srp54)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_902_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


989..1462
DNA (474bp) protein (158aa)
30S ribosomal protein S16 n=1 Tax=Segetibacter koreensis RepID=UPI0003720DEA
30S ribosomal protein S16
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_902_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

1545..2069
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003604F01
16S rRNA processing protein RimM
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_902_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(2075..3505)
DNA (1431bp) protein (477aa)
Peptidase, S41 family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W3F5_9FLAO
peptidase, S41 family
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_902_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

3584..4765
DNA (1182bp) protein (394aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003754693
DNA polymerase IV
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_902_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

4824..5459
DNA (636bp) protein (212aa)
1-Cys peroxiredoxin n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQL5_NIAKG
1-Cys peroxiredoxin
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_902_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

5543..6814
DNA (1272bp) protein (424aa)
Amidohydrolase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRS9_NIAKG
amidohydrolase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_902_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(6818..7528)
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035C1355
pseudouridine synthase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_902_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(7525..7656)
DNA (132bp) protein (44aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000361B953
pseudouridine synthase Rsu
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_902_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(7737..8615)
DNA (879bp) protein (293aa)
Pseudouridine synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRT1_NIAKG
pseudouridine synthase Rsu
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_902_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(8667..9710)
DNA (1044bp) protein (348aa)
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRT3_NIAKG
23S rRNA m(2)A-2503 methyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_902_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

9753..10949
DNA (1197bp) protein (399aa)
Acetyl-CoA acetyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRT6_NIAKG
acetyl-CoA acetyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_902_13

Not on your lists

comp(11027..12031)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=4 Tax=Myroides odoratimimus RepID=H1GK32_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KKL18494.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
transposase
OR_08142018_10m_0_1um_scaffold_902_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

12165..12392
DNA (228bp) protein (76aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_10m_0_1um_scaffold_902_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


comp(12355..12534)
DNA (180bp) protein (60aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035EB245
histidyl-tRNA synthetase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying 15 items

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